>Q86XF0 (187 residues) MFLLLNCIVAVSQNMGIGKNGDLPRPPLRNEFRYFQRMTTTSSVEGKQNLVIMGRKTWFS IPEKNRPLKDRINLVLSRELKEPPQGAHFLARSLDDALKLTERPELANKVDMIWIVGGSS VYKEAMNHLGHLKLFVTRIMQDFESDTFFSEIDLEKYKLLPEYPGVLSDVQEGKHIKYKF EVCEKDD |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MFLLLNCIVAVSQNMGIGKNGDLPRPPLRNEFRYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINLVLSRELKEPPQGAHFLARSLDDALKLTERPELANKVDMIWIVGGSSVYKEAMNHLGHLKLFVTRIMQDFESDTFFSEIDLEKYKLLPEYPGVLSDVQEGKHIKYKFEVCEKDD |
Prediction | CCCSSSSSSSSCCCCCSCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCSSSSCCCHHHHCCCCCCCCCCCSSSSSCCCCCCCCCCCSSSSCCHHHHHHHHHHHHHCCCCCSSSSSCCHHHHHHHHCCCCCCSSSSSSSCCCCCCCSSCCCCCHHHCSSSSSSCCCCCCCCCCCCCCSSSSSSSSCC |
Confidence | 9974899999938995558997788789179999999847999877765699843246544525798999879998478776799929997999999999987643068975999745899999954789867999997770265221899994665899875377666444689647999999788 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MFLLLNCIVAVSQNMGIGKNGDLPRPPLRNEFRYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINLVLSRELKEPPQGAHFLARSLDDALKLTERPELANKVDMIWIVGGSSVYKEAMNHLGHLKLFVTRIMQDFESDTFFSEIDLEKYKLLPEYPGVLSDVQEGKHIKYKFEVCEKDD |
Prediction | 7534010000004321004645141342671241034104343454441000002200410376342156020000022351427402000210330052055344565243010124340043017304143010030465160002005134730430464543555445746150413344468 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCSSSSSSSSCCCCCSCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCSSSSCCCHHHHCCCCCCCCCCCSSSSSCCCCCCCCCCCSSSSCCHHHHHHHHHHHHHCCCCCSSSSSCCHHHHHHHHCCCCCCSSSSSSSCCCCCCCSSCCCCCHHHCSSSSSSCCCCCCCCCCCCCCSSSSSSSSCC MFLLLNCIVAVSQNMGIGKNGDLPRPPLRNEFRYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINLVLSRELKEPPQGAHFLARSLDDALKLTERPELANKVDMIWIVGGSSVYKEAMNHLGHLKLFVTRIMQDFESDTFFSEIDLEKYKLLPEYPGVLSDVQEGKHIKYKFEVCEKDD | |||||||||||||||||||
1 | 3ghvA | 0.88 | 0.87 | 24.52 | 1.50 | DEthreader | -VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFKRMTTTSSVEGKQNLVIMGKKTWFSIPEKFRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYGVLSD-VQEEKGIKYKFEVYEKND | |||||||||||||
2 | 3ghvA | 0.91 | 0.90 | 25.40 | 2.76 | SPARKS-K | -VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFKRMTTTSSVEGKQNLVIMGKKTWFSIPEKFRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND | |||||||||||||
3 | 2h2qA | 0.29 | 0.28 | 8.48 | 1.05 | MapAlign | ALRAFSLVVAVDERGGIGDGRSIP-WNVPEDMKFFRDVTTLRGKNVKRNAVVMGRKTWDSIPPKFRPLPGRLNVVLSSTLQHLHADSIVAVGGLEQALQLLASPNYTPSIETVYCIGGGSVYAEALPCHLLQAIYRTTIRASESCSVFFRVPAGIEWQRETIS----EELTSANETKYYFEKLIPR- | |||||||||||||
4 | 3ghvA | 0.91 | 0.90 | 25.40 | 0.80 | CEthreader | -VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFKRMTTTSSVEGKQNLVIMGKKTWFSIPEKFRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND | |||||||||||||
5 | 3ghvA | 0.91 | 0.90 | 25.40 | 2.52 | MUSTER | -VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFKRMTTTSSVEGKQNLVIMGKKTWFSIPEKFRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND | |||||||||||||
6 | 3jsuA2 | 0.30 | 0.28 | 8.60 | 1.93 | HHsearch | NEGKKNEVFNNYTFRGLGNKGVLPWKCISLDMKYFRAVTTYVETKKLQNVVVMGRTNWESIPKKFKPLSNRINVILSRTLKKEDEDV-YIINKVEDLIVLLGK----LNYYKCFILGGSVVYQEFLEKKLIKKIYFTRINSTYECDVFFPEINENEYQIISVSDV-----YTSNNTTLDFIIYKKTN | |||||||||||||
7 | 3ghvA | 0.91 | 0.90 | 25.40 | 2.72 | FFAS-3D | -VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFKRMTTTSSVEGKQNLVIMGKKTWFSIPEKFRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND | |||||||||||||
8 | 3ghvA | 0.91 | 0.90 | 25.40 | 1.32 | EigenThreader | -VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFKRMTTTSSVEGKQNLVIMGKKTWFSIPEKFRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND | |||||||||||||
9 | 1dlsA | 0.91 | 0.91 | 25.54 | 2.68 | CNFpred | -VGSLNCIVAVSQNMGIGKNGDYPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND | |||||||||||||
10 | 3cd2A | 0.34 | 0.34 | 10.09 | 1.50 | DEthreader | MQKSLTLIVALTTSYGIGRSNSLPWK-LKKEISYFKRVTSFVPTDSSMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESLDLGNGIHSAKSLDHALELLYRTYGSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKFWSVWKKEKHLKVPHG-KINEDGFDYEFEMWTRDL | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |