Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCCCCCCCCCCCSSSSSSSCCCCSSSSSSSCCCCSSSSSSCCCCHHHHHHHHHHHHHCCCCCCSSSSSCCCCCCCCCSHHHCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCSSSSCCCCSSCCSSSSSCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMAEYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHVLRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKPKKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLATQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLGSSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGACKVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAPMSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNI |
1 | 7anwA | 0.08 | 0.07 | 2.92 | 1.05 | EigenThreader | | ------------GAGTEVQDALERALPELQQALSALKQAG-------GA---RAVGAGLAEVFQLVEEAWLLPAVGREVAQGLCDAIRLDGGLDLLLRLLQAPEAARLLEQILVAENRDRVARIGLGVILNLAKEREP-----------------VELARSVAGILEHMFKHSEETCQRLVAAGGLDAVLYWLLRHCALALGNCALHGGQAVQRRMVEKLLRLHACLAVAVLATNKEVEREVERSGTLALRCLVDASDTSQGRGPDDLQRLVPLLDSNRLEAQCIGAFYLCAEAAIKSLQGKTKVFSDIGAIQSLKRLVSYSSALAKRALRLLGEEVPRPILPSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGINYSTCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSLLVSEQQLLEDCGIHLTAAREMLHSPLPCTGGKPSGDTPDHGFSVVEKLEAGKFEDKLIQSVMGARPGALDKCMQDHDCKDW |
2 | 5b83A | 0.31 | 0.07 | 2.17 | 1.05 | CNFpred | | ----------------TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL------------------------------------RGGMQIFVKTLTGKTITLEVEPS--DTIENVKAKIQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 4iglA | 0.05 | 0.04 | 2.05 | 1.84 | MapAlign | | GSRQLVAFADMLGSGQQHLVEITADSVTNDIIYAHSECLEIYLNESGNRFSKPISLLLNFDNTCQLQAADIQLGIASLVMTVRCDLALNKPWLLNVMNNNRGAETCLFYRSSAQFWLDEKQLVEAAGQQPGNRLTQEQEYAHGSWDGQEREFRGFGRLIQRDTVTEMRHQVRALPTTDATVPSAWCSTIETRSYNYFHLTNDDNWLLGLPKEQGVLDSKTRDELLFSAGYQLAPRLFRVESEPDVWVARQGYSEFGDYSQFWRPLSQRSTLLTGKTTLKWDKHYCVVIYSLTDANDNQHYVVLNPFGEVIASRFWGTEAGKDAGYSTPEIPRTPPHSLTITTDRYDSDDQQQLRQRILFSLQSAQRVEAGESWQRSEDSSLVVNVSGTPALVVTDNRWAVSGRTEYDGKGQGIRVYQPYFFADTHIYDPLGREYQVITAKGYRRERQYTPWFVVNQDENDTA----------------------------------------------------- |
4 | 3q3fA | 0.38 | 0.08 | 2.36 | 1.57 | HHsearch | | FSNRGKLTWRADGSSDWLIYKTTDHYGGQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGTKIR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 3qdeA | 0.07 | 0.07 | 2.94 | 0.84 | CEthreader | | YHKTEYRERRNHYAFYSVNAKISGFDSDRDSFIAPQAVVNGKSNNSVADGWAPIASHSIEIELNPGEQKEYVFIIGYVENKDEEKWESKGVINKKKAYEMIEQFNTVEKVDKAFEELKSYWNALLSKYFLWNQYQCMVTFNMSRSASYFESGIGRGMGFRDSNQDLLGFVHQIPERARERLLDLAATQLEDGSAYHQYQPLTKKGNEIGSNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNLGPHGLPLIGRADWNDCLNLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDHIDAMKEAILKYGYDGEWFLRAYDDFGRKVGSKENEEGKIFIESQGFCVMAEIGLEDGKALKALDSVKKYLDTPYGLVLQNPAFPPGYKENAGIFCHNNAWIICAETVVGRGDMAFDYYRKIAPAYIEDVSDIHKLEPYVYAQMVAGKDAKRHGEAKNSWLTGTAAWNFVAISQWILGVKPDYDGLKIDPCI |
6 | 4uvkA | 0.05 | 0.04 | 2.08 | 0.85 | EigenThreader | | KVHEFKKKSKYPPQLLYVGTGPLIIDLLTWLSPLSVCKI-------------RSLRYIATLTLYLFQDFLTDHVVDLDKNYSVENKKKRPNGKTQGIIDNIIKLCFVHRFKDVDETIRCESMVHLASWTKSFPEYFLK---------------------VTFLKYFGWLLSDRLQVLKILPQLISAVRQFFERFKERILEIALKDSNLEVRLSAVQVLVEVASL---------------------------GYLEDTEILSISSLIFEDNEIKVSSLGKNSRYLASVAKFFACITEEKFQEFTNNRVLPKELFDVKGSSAVRIGIFMNLLNESLTEYLQKVPQIGSEKRIHILFQAAEFLYPYFGSLIKFEGEFTHESLLLPTDSNNIILYVTTLHGLAYGGTHMRGQ---PKFKVAEAVLPHLDQLIKRLPIESSNVLASILGVFNLFAFEDWIHTGYEKDIRKILEKIIKAFNESTLTSGAQDLKYKSFSETVSQVRKLGFNELDELWLNHIS |
7 | 2kdiA | 0.41 | 0.07 | 2.17 | 0.74 | FFAS-3D | | ---------------------------FQIFAKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIWAGKQLEDGRTLSDYNIQRESTLHLVLRLRGGSMGG-AADEEELIRKAIE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6u9eA | 0.08 | 0.07 | 2.82 | 0.85 | SPARKS-K | | LEDIHNSLTLKNPHIEKLEVCENIYG--------INGLTFDLALLSPNQPILLDIQINDSFHHKRTTRFIAIGFNSNSIDIHVKKFKIQFHDPLKALWTKHKPSY----IALNKSLDDIFKDNFFFDSLFLDTNKSNNPQAFISTVNRNFYDFFQQLEQNKCYLKYFCDKKS------------------GKVSYHVVDQVDN--------------------------DLQR-NIVNSDEDLKKLSPYDISCFQILISNKSNFYVKEKNICPDV------TLNTQRKEDRKISD-TLVKPFSSILKDNLQSVEYIQSNNDDKQEIITTGTLPFLDTEITLSKLDNDQNYLIKSLYISQRKLLFKRSKYCSKQLYENHDNSITYKIKDYNLTPEYPKYKSFSNFDSKKAYKFFKNHKPEESSIAEFQENGEKGTSAILNSKADMLSDKSSDKPIIYLPLKVNINSANNQFIPLRIELISNSAISTKKAQQQLLQRQLLGSKENCEMAYTQTSDSE |
9 | 5vixA | 0.34 | 0.07 | 2.10 | 0.92 | CNFpred | | ---------------------------MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR------------------------------------GGMQIFVKTLGKTITLEVES---NDTIENVKSKIQD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
10 | 2vz8B | 0.07 | 0.05 | 2.06 | 0.67 | DEthreader | | -GYSMIGCQMMR--FFFDFSITIDSSLALAYAIRGGECSAAVVGGLNVAVVAVLLTKKSLA-----------------------------------M-NEIAAV----KRPVWFIC-----RF-DSILRSDQKRSDLLIALIDLLT---LGLQPAYAQE-AVLSSYWRGYCIKEAVFMESIAPTLLSVNLVIAP----------------------MKKDHRDNLEFFLSNVGRLHLAGIKWDHSQAWDVPSADPSGSSCSSVAVYK-----SPDH-FPGYLWLTWVVFED--LEASHAFE-LASGKV--------VYKDLRLRGY---------QLVLESDL-------------ILAPGQLGYSVAP-FVNVLSISLVMLATGSPLTRDCMKTFCPPHKSYV--ITGGLG-FGLQLAQWLRLRGAQKL----VLTS--GIRTYQARQV---------VSTSNAGASLITEVGVFNLAMVLRDVGVVLE------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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