>Q86X19 (198 residues) MELPDPVRQRLGNFSRAVFSDSNRTGPESNEGPENEMVSSLALQMSLYFNTYYFPLWWVS SIMMLHMKYSILPDYYKFIVITVIILITLIEAIRLYLGYVGNLQEKVPELAGFWLLSLLL QLPLILFLLFNEGLTNLPLEKAIHIIFTLFLAFQVVAAFLTLRKMVNQLAVRFHLQDFDR LSANRGDMRRMRSCIEEI |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MELPDPVRQRLGNFSRAVFSDSNRTGPESNEGPENEMVSSLALQMSLYFNTYYFPLWWVSSIMMLHMKYSILPDYYKFIVITVIILITLIEAIRLYLGYVGNLQEKVPELAGFWLLSLLLQLPLILFLLFNEGLTNLPLEKAIHIIFTLFLAFQVVAAFLTLRKMVNQLAVRFHLQDFDRLSANRGDMRRMRSCIEEI |
Prediction | CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC |
Confidence | 999878987203456665678877664224688776247889999999999999999999999999997138850024799999999999999999831024545326999999999999999999999823322216999999999999999999999999999999988888998765421457310144123129 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MELPDPVRQRLGNFSRAVFSDSNRTGPESNEGPENEMVSSLALQMSLYFNTYYFPLWWVSSIMMLHMKYSILPDYYKFIVITVIILITLIEAIRLYLGYVGNLQEKVPELAGFWLLSLLLQLPLILFLLFNEGLTNLPLEKAIHIIFTLFLAFQVVAAFLTLRKMVNQLAVRFHLQDFDRLSANRGDMRRMRSCIEEI |
Prediction | 873365146335424540134464455546444644211213100001312321211231123012221321343321000000311232133102102301134432302201331333333222101023433323113000111031133033101200220054422402133155157464556414532676 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC MELPDPVRQRLGNFSRAVFSDSNRTGPESNEGPENEMVSSLALQMSLYFNTYYFPLWWVSSIMMLHMKYSILPDYYKFIVITVIILITLIEAIRLYLGYVGNLQEKVPELAGFWLLSLLLQLPLILFLLFNEGLTNLPLEKAIHIIFTLFLAFQVVAAFLTLRKMVNQLAVRFHLQDFDRLSANRGDMRRMRSCIEEI | |||||||||||||||||||
1 | 6r9tA | 0.08 | 0.08 | 2.99 | 1.00 | DEthreader | ---A-QATLDDFSSNLTEMSRGVLLL---L-IGESDTDPFDALMQLAKAVASAAAALVLKAKSVA-QRT-E-DSGLQTQVIAAATQCALSTSQLVACTKVVAPTISSVCQEQLVEAGRLVAKAVEGCVSASQAATDLLRGVGAAATAVTQALNELLQHVKAHATGAQLEHAAKLLVQGGLAVNLAGGLRLAASDVLDA | |||||||||||||
2 | 6ssrA | 0.06 | 0.04 | 1.60 | 0.61 | CEthreader | ------------------------------------------NSILLAAVSILSACQQSYFALQVGKARLKYGSPEFERVFRAQQNCVEFYPIFIITLWMAGWYFNQVFATCLGLVYIYGRHLYFWGYSEA---------AKKRITGFRLSLGILALLTLLGALGIANSFLDEYLDLN-------------------- | |||||||||||||
3 | 3d19A | 0.09 | 0.07 | 2.68 | 0.98 | EigenThreader | NETDPEQIKRFIWGFKRKILGLILTCKLPGQNNFKLDALPDAIIKENVFFLRIMADHAKFIGHLL------DPSE--RKLVDTARNFSNDFDELMYQAIDLESMKPQQFLDQNRVSVASLRDFKKTARDLIEQIIHPLLADHVFREADRFLEIIDMYDVHL------------------------------------- | |||||||||||||
4 | 1pw4A2 | 0.12 | 0.10 | 3.42 | 0.94 | FFAS-3D | ----------------------------------QYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDVFRGNRGATGVFFMTLVTIATIVIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDVMIGGSILAVILLIVVMIGEKRRHEQLLQEL | |||||||||||||
5 | 6w2rA | 0.08 | 0.08 | 2.97 | 0.95 | SPARKS-K | -GTTEDERRELEKVARKAIEAAREGNTDEARESGTKTAVKLALDVALRVAQEAAKAIDEAAEVVVRIAEESNN-------SDALEQALRVLEEIAKAVLKSEKTEDAKKAVKLVQEAYKAAQRAIEAAKRTGT-------PDVIKLAIKLAKLAARAALEVIKLKKIVKAIQEAVESLREAEESGDPRERVREAVERA | |||||||||||||
6 | 3rkoB | 0.12 | 0.10 | 3.56 | 0.92 | CNFpred | -------FREMVELAPAHFA---------------DGNNMLMWATLMLLGGAVGKSAQLP-LQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILA----------HHEQNI | |||||||||||||
7 | 5vjsA | 0.06 | 0.05 | 1.98 | 1.00 | DEthreader | ------------------------------RQEHQLAQFQQLLQEIQQLGRELLKGELQGIKQLREASEKARPKSVLQKILEDEEKHIELLETLQQTGQEAQQLLIQQLLQKHQQLGAKILEDEEKHIELLETILGLRELLKGELQGIKQYRELQQLGQKAQQLVQKLQQTGQKLWQLG------------------- | |||||||||||||
8 | 6wvgA | 0.12 | 0.12 | 4.13 | 0.84 | MapAlign | KFEGDTLVNLKGIDFKEDGNILGHKLEYNMGMSSLKLLK-YVLFFFNLLFWICGCCILGFGIYLLIHFGVLFHNLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLYVAKGLTDSIHITICVCVIEVLGMSFALTLNSQIDKTSNSHNVYITADGIKANFKIRHNVEDGSVQL | |||||||||||||
9 | 5xjjA2 | 0.10 | 0.09 | 3.18 | 0.56 | MUSTER | LTTETLHYVISSGVAAAVSTRVSNNLGAGNPQVARVSVLAGLCLWLVESAFFSILLFTFRNIIGYAKEVVDYVADLSPLLCLSFILDGFTAVLNGVARGSGW----HIGAWNNIFSYYLVGAPVGVYLAFRHDL-------NGKGLWCGVVIGSTVQATVLAIVTASMNWKEQAEKARKRI----------------- | |||||||||||||
10 | 5tj5A | 0.14 | 0.11 | 3.65 | 0.55 | HHsearch | KPAPGLLNMLIN---MFLSPGTID-DE----L----YPHQAKVQVFLLLMALVCIPW------LLLVKPLHFKF-----DI---MIHQVIHTIEFCLNCVSHTASY----LRLWALSLAHAQLSSVLWTMTFGFFVTVFAMWFALTCAVLVLMEGTSAMLHSLRLVESMSKPYEPFAFEYK-------------DMEV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |