Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAQHDFAPAWLNFPTPPSSTKSSLNFEKHSENFAWTENRYDVNRRRHNSSDGFDSAIGRPNGGNFGRKEKNGWRTHGRNGTENINHRGGYHGGSSRSRSSIFHAGKSQGLHENNIPDNETGRKEDKRERKQFEAEDFPSLNPEYEREPNHNKSLAAGVWEYPPNPKSRAPRMLVIKKGNTKDLQLSGFPVVGNLPSQPVKNGTGPSVYKGLVPKPAAPPTKPTQWKSQTKENKVGTSFPHESTFGVGNFNAFKSTAKNFSPSTNSVKECNRSNSSSPVDKLNQQPRLTKLTRMRTDKKSEFLKALKRDRVEEEHEDESRAGSEKDDDSFNLHNSNSTHQERDINRNFDENEIPQENGNASVISQQIIRSSTFPQTDVLSSSLEAEHRLLKEMGWQEDSENDETCAPLTEDEMREFQVISEQLQKNGLRKNGILKNGLICDFKFGPWKNSTFKPTTENDDTETSSSDTSDDDDV |
1 | 5jcss | 0.13 | 0.12 | 4.27 | 1.19 | SPARKS-K | | KAANGF----QLISTVRINEDHQKDSSNKIYNLNMIGMRIELEEPSEEDLTHILAQK-FPILTNLIPKLIDSYKNSIYMNTKFISLNKGAHTRVVSVRDLIKLCERLDILFKNNGINKPDQLIQSSVYDSIFSADCFAGAIGEFKALASSRISLFLT--QHVPTLENLDDS------IKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMTEPAKMLAKKLTYKPKTVAVPNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVESLVKTIRAGESDLLTEPDSRSILLSEKGDAEPIKAHPDFPATDVLPMGIRS--------RFTEPERDITDLLSIIDKYIGKYDIAELYLEAKKLSDNNTIVDGSNQKPHFSIRTVTDIIHIYGLRRSFLTLLDQKSEAIL |
2 | 5wyjBE | 0.08 | 0.08 | 3.13 | 1.45 | MapAlign | | -----------------SNGVPFATGTLGSTFYIVTCVGKTFQIYDANTLHLLFVSEKETPSSIVALSAHFHYVYAAYENKVGIYKRGIEEHLLELNVEHLCIFGDYLCASTDSDPQDKYPSEFYTKLTVTEIQGGEIVSLQHLATYLNKLTVVTKSNVLLFNVRTGKLVFQITTAEPAPVLDIIALGTVTGEVLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQATFLNGQPIIVTSGGDNSLKIVALAIENARIGEWENIITAHKDEKFARTWDMRNKRVGRWTFDTTDDGFVKSVAMSQCGNFGFIGSSNGSITIILRKKYKLHKRAVTGISLDGMNRKMVSCGLDGIVLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFIVSASLDSTIRTWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTGNGICIW |
3 | 1vt4I3 | 0.07 | 0.07 | 2.86 | 0.90 | CEthreader | | LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5nnpA | 0.06 | 0.05 | 2.47 | 0.77 | EigenThreader | | TREANLFRTVIRHYEDKQYKRGLKAAEQILKKNPKHGDTMSMKALILNAQGKTEEAFALAKEALTIDMKSYICWHVYGILYRTNKNFDEAIKAYKFALKLEPESHQIQRDLAVLQIQMRDYAGYVQSRLNMLKARPTTAKAYLTLMFDKGVPSTFANLKHLYSDSFKKETLA-----SLAEEYLNEYVNARPSGSKGKGAALYYLAQHYNYYMSRDLTRALEYVEKAIELDPKNVDFHMTKARIFKHQGDLAKAAETMDYARSLDPKDRYINSKAAKYQLRNNELATMGLFTRAETAGGPLADLTDMQCIWFLTEDGEAWQRRGNTALALKRYHTVFSIFDTWQEDQFDFHSFSLRKGQYVDMVRWEDRLREHPFYFRAALDAVNLYLSMYDKPKDDDPNGEKLAATKDPLGDAMKFLNYILQFSPKNIDGQIAGFEVYIRKKKYLLALRCLKAASAIDKNHPKVLEQAAKLR |
5 | 5mqfT | 0.09 | 0.07 | 2.64 | 0.58 | FFAS-3D | | -----------------------------------------------KNSLAY---------------QRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVA-IINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDINLVSFRRTIYLAIQSSLDFEECAHKLLKM-EFPESQTKELCNMILDCCAQQRTYEK-----FFGLLAGRFCMLKKEYMESEQYDTIHRLETNKLRNVAKMFAHSVLECIKLSEETTTSSSRIFVKIFFQELCEETLQPFFEGLLPRTRFAINFFTSITDELREH------------------------------------------------ |
6 | 5kcs1w | 0.10 | 0.10 | 3.51 | 1.13 | SPARKS-K | | TTRTDNTLLERQRGITIQTGITSFQWENTKVNIGHMDFLAEVYRS----LDGISAKDGVQAQTRIIDLSTVYQDIKEKLSAEIVIKQKVELYPNVCVTNFTESEQWDTDLLEKYMSGKSLEALELEQEESIRNCSLFPLYHGSAKSNIGIDNKFYS-----STHRGPSELCGNVFKIEYTKKRQRLAYHLRDSVRVSEKEKIKVTEMYTSINGELCKIDAYSGEVILQNEFLKLNSVLGDT---KLLPQRKKIENPHPLLQTTVEPSKEQREMLLDALLEISDSPLLRYYVDSTTHEMEVISALLQEKYHVEIEITEPTVIRPLKNAEYTIHIEVPPNPFWASIGLS---VSPLPLGSGMQYESSVSLGYLNQS---FQNAVMEGIRYGCEQGLYGWNVTD-CKICFKYSTPADFRMLAPIVLEQVLKKAG--------TELLEPYLSFKYCANIVDTQLKNNEVILSGEIPA |
7 | 5cwgA | 0.14 | 0.03 | 0.95 | 0.45 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEKEELRERLVKIVVENAKRKG-----------------------------DDTEEAREAAREAFELVREAAERAGIDSSEVLELAIRLIKEVVENAQ-------GYDISEAARAAAEAFKRVAEAAKRAGI---------------------------------------------- |
8 | 6bq1A | 0.07 | 0.04 | 1.71 | 0.67 | DEthreader | | ---------------------------------------------------------------G--GGGGGGGGGGGGG-GGGGG---------GGGGGGGG-GGGGGGGGGGGG-----------------GGGGGGGGG--G-------GGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------------------GGGGGGGGGGFHQFLLNFNHITVPDTYEARESIVKDFAARCGMILQAMKPTKLAGYNKQNKRLREDISMIEITWYNPLSA-PE--L--ELDQ-E-----------------------------AIK-YP----MQSAAPYAIFKVCRDMLALQIIDLFKYLLLQIKDRFMFEMVVSLVTLMLD--QTIKLLKHRFSPFIVISCSN |
9 | 1vt4I3 | 0.07 | 0.07 | 2.86 | 1.37 | MapAlign | | EDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGG |
10 | 1zvoC | 0.11 | 0.10 | 3.55 | 0.99 | MUSTER | | ----RLQ---LQESGPGLVKPETLSLT-IVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPS----LRGRVTISVDTSRNQFSRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNITGYHPTSVTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKAT------FVVGSDLKDAHAGKVPTGGVEEGLLERHSNGSQSQHSR-PRSLWNAGTSNHPSLPPQRLMALREPAAQAPVKLSLNL--------------LASSDPPEAASWLL--EVSGFSPPNILLMEDQSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQRTLLNASRSLEVSYV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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