Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC SNLITSLLGLCQSKKSRVALKAQENLLLLVSMASPAAATYLVQSSACCPAIVRHLCQLYRSMPVFLDPADIATLEGISWRLPSAPSDEASFPGKEALAAFLGWFDYCDHLITEAHTVVADALAKAVAENFFVETLQPQLLHVSEQSILTSTALLTAMLRQLR |
1 | 2fv2C | 0.13 | 0.10 | 3.43 | 0.54 | CEthreader | | TEIIPLCLRIMESGSELSKTVATFILQKILL--DDTGLAYICQTYERFSHVAMILGKMVLQLSKE-----------------------------PSARLLKHVVRCYLRLSD--NPRAREALRQCLPDQLKDTTFAQVLKDD-----TTTKRWLAQLVKNLQ |
2 | 6h8qA1 | 0.06 | 0.06 | 2.45 | 0.72 | EigenThreader | | QNFAEFMTKVANLYVGNLVLDLLTWLSSFSVCKIRCFRYISTL---TLYLFQDYLTQQAVNLEKNYLAKLSKQLSLEEKKKRPNNKTKLESTIAETQGSKVVIDSIIDNIVKLCSDLIRSESMLHLSIWIKNYPFLKYFGWLLSLQVTKILPHLII-----Q |
3 | 3ea5B5 | 0.10 | 0.07 | 2.77 | 0.68 | FFAS-3D | | -ALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELALQSYNFALSSIKDVVPNLLNLLTRQN----------------EDPEDDDWNVSMSAGACL------QLFAQNCGNHILEPVLEFV----------EQNITADNWRNREAAVM---AFGSI- |
4 | 3nowA | 0.11 | 0.10 | 3.81 | 0.79 | SPARKS-K | | LKLAEACRRFLIKPGKDIRRWAADGLAYLT--LDAECKEKLIEDKASIHALMDLARTTFVNLCN-AYEKQEMLPEMIELAKFAKQHIPEEHEINKRITVLANITTALCALAKTESHNSQELIARVLNAVCGVKALLRMALEGTEKGKRHATQALARIGITIN |
5 | 3nd2A | 0.12 | 0.10 | 3.49 | 0.71 | CNFpred | | NQIKTNALTALVSIEPRIANAAAQLIAAIADIEWPELMKIMVDN-NVKRASLLALGYMCESADPQS---------------------------QALVSSSNNILIAIVQGAQSTSKAVRLAALNALADS-LMQVVCEATQAEDIEVQAAAFGCLCKIMSLYY |
6 | 3w3tA | 0.07 | 0.06 | 2.52 | 1.00 | DEthreader | | DQIIQFTDMVIKKLEPPARTTALELLTVFSENAPQ-MCKSNQNYGQTLVMVTLIMMTEVSIDDDDAA-EWIESDDT-DDEE---------------EVTYDHARQALDRVALKLGGEYLAAPLFQYLQQMITSERF--V--L-NDPHPRVQYGCCNVLGQID |
7 | 5cmwA | 0.08 | 0.06 | 2.48 | 0.71 | MapAlign | | SEPYQIDIRRATNTDAWGPPKHLAKVLRNR-------YQVPLY--LMTEYTLKRLVDHIATR--------------------PKNLYEKARKDGSEWRVVLKCLVVIEFLLLNVDGDELNQIRSCLLTHILTREIAQFVFGKMEIHERGIRKKGELILQYL- |
8 | 4rv1A2 | 0.17 | 0.17 | 5.46 | 0.56 | MUSTER | | AGGVEVLVKLLTSTDSEVQKEAARALANIAS-GPDEAIKAIVDA-GGVEVLVKLLTS-----DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSSEVQKEAARALANIASTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGGW |
9 | 1vt4I3 | 0.09 | 0.07 | 2.79 | 0.92 | HHsearch | | YALVDHYNIKTFDSDDLIPP-----------YLDQYFYSHIGHHLKNIEH--PERMTLFR-----MVFLDFRFKIRHDSTAW---NASGSI--LNTLQQL----KFYKPYICDNDPKYERLVNAILD--FL-----PKIEENLKYTDLLRIAIFEEAHKQVQ |
10 | 6homA2 | 0.13 | 0.10 | 3.43 | 0.54 | CEthreader | | -EIIPLCLRIMESGSELSKTVATFILQKILL--DDTGLAYICQTYERFSHVAMILGKMVLQLSKEP-----------------------------SARLLKHVVRCYLRLSD--NPRAREALRQCLPDQLKDTTFAQVLKDD-----TTTKRWLAQLVKNLQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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