Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCSCCCCCSCCCSSSSSSSSCCCCCCCCCSSSSSCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCSSSSSSCCCCSSSSCCCCCSSSSSSSCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCSSSSSSSCCCC MAGMKTASGDYIDSSWELRVFVGEEDPEAESVTLRVTGESHIGGVLLKIVEQINRKQDWSDHAIWWEQKRQWLLQTHWTLDKYGILADARLFFGPQHRPVILRLPNRRALRLRASFSQPLFQAVAAICRLLSIRHPEELSLLRAPEKKEKKKKEKEPEEELYDLSKVVLAGGVAPALFRGMPAHFSDSAQTEACYHMLSRPQPPPDPLLLQRLPRPSSLSDKTQLHSRWLDSSRCLMQQGIKAGDALWLRFKYYSF |
1 | 7c3mA | 0.84 | 0.61 | 17.29 | 1.00 | DEthreader | | ----------SSWELRVFVGEE-D-PE-AESVTLRVTGESHIGGVLLKIVEQINRKQDWSDHAIWWEQKRQWLLQTHWTLDKYGILADARLFFGPQHRPVILRLPNRRALRLRASFSQPLFQAVAAICRLSIRHPEE-LSLLRAP------------------------------------------------------MLSRPQPPPDLLRLPRPSSLSDKTQLHSRWLDSSRCLMQQGIKAGDALWLRFKYYQF |
2 | 7c3mA | 0.89 | 0.75 | 21.09 | 2.79 | SPARKS-K | | -------------SSWELRVFVGEEDPEAESVTLRVTGESHIGGVLLKIVEQINRKQDWSDHAIWWEQKRQWLLQTHWTLDKYGILADARLFFGPQHRPVILRLPNRRALRLRASFSQPLFQAVAAICRLLSIRHPEELSLLRAPV---------------APALFRGMPAHFSDSAQTEACYHM------------LSRPQPPPDPLLLQRLPRPSSLSDKTQLHSRWLDSSRCLMQQGIKAGDALWLRFKYYSF |
3 | 5xpyA | 0.52 | 0.39 | 11.42 | 0.95 | MapAlign | | -------------GTWELSVHVTDL---NRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALWWEKKRTWLLKTHWTLDKCGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSLLKKP-----------------------------ALELEPGILAVSQPVTSPEILAKM---------------FKPQALLDKAKTNQGWLDSSRSLMEQDVKENEALLLRFKYYSF |
4 | 5xpyA | 0.54 | 0.42 | 12.07 | 0.67 | CEthreader | | ---------MGSDGTWELSVHVTDLNRD---VTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALWWEKKRTWLLKTHWTLDKCGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSLLKKPAL--------------------------------------------ELEPGILAVSQPVTSPEILAKMFKPQALLDKAKTNQGWLDSSRSLMEQDVKENEALLLRFKYYSF |
5 | 5xpyA | 0.54 | 0.42 | 12.17 | 1.75 | MUSTER | | ---------MGSDGTWELSVHVTDLN---RDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALWWEKKRTWLLKTHWTLDKCGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSLLKKPA----------LELEPG----------------------------------ILAVSQPVTSPEILAKMFKPQALLDKAKTNQGWLDSSRSLMEQDVKENEALLLRFKYYSF |
6 | 7c3mA | 0.93 | 0.79 | 22.04 | 5.29 | HHsearch | | -------------SSWELRVFVGEEDPEAESVTLRVTGESHIGGVLLKIVEQINRKQDWSDHAIWWEQKRQWLLQTHWTLDKYGILADARLFFGPQHRPVILRLPNRRALRLRASFSQPLFQAVAA---------ICRLLSIRHPEELSLLR------------------APVAPALFRGMPAHFSDSAQTEACYHMLSRPQPPPDPLLLQRLPRPSSLSDKTQLHSRWLDSSRCLMQQGIKAGDALWLRFKYYSF |
7 | 5xpyA | 0.53 | 0.41 | 11.96 | 2.03 | FFAS-3D | | MGS---------DGTWELSVHVTDLN---RDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALWWEKKRTWLLKTHWTLDKCGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSLLKKPALELEPG--------------------------------------------ILAVSQPVTSPEILAKMFKPQALLDKAKTNQGWLDSSRSLMEQDVKENEALLLRFKYYS- |
8 | 2kmaA | 0.16 | 0.10 | 3.38 | 0.97 | EigenThreader | | IDPFT-------MVALSLKISIGN----VV-KTMQFEPSTMVYDACRMIRERIPEALAPNDFGLFLSDKGIWLE-AGKALDYYMLRNGDTMEYRKKQRPLKIRMLDGTVKTIMVDDSKTVTDMLMTICARIGIDEYSLVRELM---------------------------------------------------------------------EEKKDEL------NWHGRTLREQG----VEEHETLLLRRKFFYS |
9 | 7c3mA | 1.00 | 0.84 | 23.62 | 4.03 | CNFpred | | -------------SSWELRVFVGEEDPEAESVTLRVTGESHIGGVLLKIVEQINRKQDWSDHAIWWEQKRQWLLQTHWTLDKYGILADARLFFGPQHRPVILRLPNRRALRLRASFSQPLFQAVAAICRLLSIRHPEELSLLRAP---------------------------VAPALFRGMPAHFSDSAQTEACYHMLSRPQPPPDPLLLQRLPRPSSLSDKTQLHSRWLDSSRCLMQQGIKAGDALWLRFKYYSF |
10 | 5xpyA | 0.46 | 0.34 | 9.91 | 1.00 | DEthreader | | MGS---------DGTWELSVHVTD-L--NRDVTLRVTGEVHIGGVMLKLVEKLVKKDWS-DHALWWEKKRTWLLKTHWTLDKCGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSLLKKP------------------------------------------------------GILAVSQPVTSPILAMFKPQAL-DKAKTNQGWLDSRLMEQDVKENEALLLRFKLAWQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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