Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APRHSRRNEGVVGGEDYEEVDRYSRQGRVARAGTRGAQQSRRGSWRYKREEEDREVAAAVRASVAAQQQEEARRSEDQEEGGRPKKEEAAARGPEDPRGPRRSPRTQGEGPGPKETSTNGPVSQEAFSVTGPAAPGCVGVPGALPPPSPKLKDEDFPSLSASTSSSCSTAATPGPVGLALPYAIPARGRSAFQEEDFPALVSSVPKPGTAPTSLVSAWNSSSSSKKVAQPPLSAQATGSGQPTRKAGKGSRGGRKGGPPFTQEEEEDGGPALQELLSTRPTGSVSSTLGLASIQPSKVGKKKKVGSEKPGTTLPQPPPATCPPGALQAPEAPASRAEGPVAVVVNGHTEGPAPARSAPKEPPGLPRPLGSFPCPTPQEDFPALGGPCPPRMPPPPGFSAVVLLKGTPPPPPPGLVPPISKPPPGFSGLLPSPHPACVPSPATTTTTKAPRLLPAPR |
1 | 5jcss | 0.09 | 0.09 | 3.41 | 1.69 | SPARKS-K | | QKDSSNKIYNLNMEEDLTHAQKFPILTNLIYMNTKFISLNKGAHTRVVSVRDLIKLCERLDISVYDSIFSEAADAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLR-----LMEQISVCIQM-----TEPVLLVMLAKKLTVINVSQQTETGDLLGGYKPKTVAVPIQENFETLFNATFSEKFHKMLHRCFNKNQWKNVVKLWAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVVEGSLVKTIRANLATADTTEPDSRSILLSEKGDAEPIKAHPDFRIFACMNPATDVGKRDLPMGHSPERDITDLKYIGKYSVSDEWVGNDIAELYIVDGSNQKPHFSYVTDIIHIYMSFTLLDQKSEAILKPRLKNVKSIMSYIITPFVE |
2 | 1kv9A | 0.07 | 0.07 | 2.87 | 1.16 | MapAlign | | -RGLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYLREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNLSSILAIRPDTGKLAWHYQVTPGDSWD---FTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFVTWAEKVDLATGRPVEAIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIDLRQSSDATREHFQQIVLQGALKPLGMPSFDDSLKPEEVEQIKLYVMSREYEDY-------- |
3 | 2nbiA | 0.12 | 0.12 | 4.14 | 1.24 | MUSTER | | SSQPSECADVLECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIPYGDSSRPLDCTDPAVNRPDCDECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDCNVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSPDGSPPVCSPTMMPSPLPSPT |
4 | 6ybt1 | 0.06 | 0.06 | 2.54 | 0.57 | CEthreader | | DEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRVVTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQ |
5 | 6gmhQ | 0.08 | 0.08 | 3.18 | 0.78 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSF---VLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYV |
6 | 3cnfB | 0.08 | 0.08 | 3.15 | 0.67 | FFAS-3D | | SGRNEKWDQALYLSEHFPAFTPQGFLRTDDLAIAANFPRASRNPQTYQRGTVTNEFASRFRTIVERAVQDDMQKATRSCTKQWLRHLETQFDNIAVAHTD--------HLSVVYATMSNFMLNFNNFTHVAVVLYQSGVINGPASTEVLVVMPDYYANLQMNNNRYHESVLEIADDAVRQLRALMPTLSTSQIRHAIERIAQITDVDSTDYGKLTLRFLGTLTRSLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELQLRRLSVGLRLITNPRIARRFNGVRI---------MYLTDDDPDPDFVPDVPEGYVAVQYAHRLFSSSLANKRNRVTYTHPPTGMAYPSPTGRPHVHMTINERAGMSKLVADNIDILDIVMTPSEGYTQHVDAESIMTAPKGKLFHLQFMDGLLRPEASGEDMYPLQPISVARSMRAIVNHNEVDRPREM-- |
7 | 6rlbD | 0.11 | 0.09 | 3.42 | 1.59 | SPARKS-K | | -----IRWETKSCQTASIATASASAQARNHVDAQVQTEAPVPVSVQPPSQYDIPRLAAFLRRVEAMVIRELNKNWQSHAFDGFEV-----NWTEQQQMVSCL----------YTLGYPPAQAQGLHVTSISNSTGSVVACAYGRLDHGDWSTLKSFVCADRRDLRPQQPSAVVEVPSAVLCLAFHPTQPS--------HVAGGLY------SGEVLVWDLSRL-----------------EDPLLWRTGLT-DDTHTDPVSQVVWLPEPGHSHRFQVLSVATDGKVLLWQGIGVGQLQLTKLKKHPRGETEVGSSFDPRLFILGTEAPAQFTFSPHGGPIYSVSCSPFHRNLTDGHVMLQAPPLTSLQLSLKYL----FAVRWSPVRPLVFAAASGKGDVQLFDLQKSSQKPTVLIKQTQDESPVYCLEFNSQQTQLLAAGDAQGTQLSTEFTEQG |
8 | 5cskA | 0.04 | 0.02 | 1.07 | 0.50 | DEthreader | | LTHTAAAQVYIALAANVCVASTFSEEEILVRLREILDLITFNENEIRIEPALAFQLE---------------------------------------------HIR--DDISIAVFD---KDPQTGAPVPLRYTEFSMPYPVKQPRYKALMGDITFKIGSFGPQ--E---------DEFFNKVTEAIPRIYL-A--AN-SGAR-------I--GMAE-------------EIVPLFQ-V-AWNDAANP-KGFQYLYLTEGMTLKKFD-KENSVIGSEDLGVCLRGSGLAIYLRLQQINNIALNADQME-----------------KL-DTMNRL---------------------------------D----DKYRELRSQLSNKLHQISQLAD--------------------------------------------------------------- |
9 | 5ifeA | 0.08 | 0.07 | 2.88 | 1.08 | MapAlign | | VLLRTVLDPVTGDLSDTRTGSRPVKLFRVRMQGQEAVLAMSSRSWLNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVC-----RFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIVIVSDVQESFIWVRYKRNENQLIIFADDWVTTASLLDYDTVAGADK----------------------FGNICVVRLPPNTNDEVDNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTRYAFDYK-------- |
10 | 1zvoC | 0.11 | 0.11 | 3.79 | 1.18 | MUSTER | | ESGPGLVKPSIVSGGPIRRTGYY-IRQPPGKGLEWIGGVYYTGSIYYNPSLRGR-----------------VTISVDTSRNRSMSAAARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDLITGYHPTSVTVTMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRTASKSKKEIFRWPESPKAQASSVPTAQP---QAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATVVGSDLKDAHVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTS-TLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPE-AASWLLCEVSGFSPPNILLMREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSRTLLNASRSLEVSYVTDHGPM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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