Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCSSSSSSSCCCCCSHHHHHHCCCCCCSSSSSSSCCCCCSSSSSSSHHHHHHHHHHHHHCHHHHCCCCSSSSSSSSCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCSSSSSSSSSSSCCCCCHHCHHHHHHHHHHHHCSSSHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSCSSSSSSCCCHHHCCCCCCCCCCCCCCSCCCCCCSSSSSCCHHHCCCCCCCCCCC MRLPGVPLARPALLLLLPLLAPLLGTGAPAELRVRVRLPDGQVTEESLQADSDADSISLELRKPDGTLVSFTADFKKDVKVFRALILGELEKGQSQFQALCFVTQLQHNEIIPSEAMAKLRQKNPRAVRQAEEVRGLEHLHMDVAVNFSQGALLSPHLHNVCAEAVDAIYTRQEDVRFWLEQGVDSSVFEALPKASEQAELPRCRQVGDHGKPCVCRYGLSLAWYPCMLKYCHSRDRPTPYKCGIRSCQKSYSFDFYVPQRQLCLWDEDPYPG |
1 | 4ojcA | 0.06 | 0.06 | 2.58 | 0.59 | CEthreader | | KLCCDVRFKPYKNMTFLAVKLEQPTTYATFVYAAYDFVNGYWVEKDKTKIRSQLDGGTQDRHLDQKRRISLAVTAGRASHQLETGMYFSRTSNETEELRMQPLNEITDNNFDRLGWYRMDDSGHFHVNNGVVKMDDIHKAKVKNCKEQTYKSILSANLEVIKPWIQSARIFDSSLNLQISIHLESQNLVFFHNASRIRDFSGSIIVDSKSNRLFNLTVYEASGKIDGSVKMSTGFGSDTIHTFTAYVSDLHASNRSMIIPLPAIVGQGARAIC |
2 | 5jbdA | 0.05 | 0.05 | 2.20 | 0.70 | EigenThreader | | YMQEKSIYYDAITTLMRARKQFV----SGGQTMTKLNN---NLLASVRYGKGVVSGMAVLVGNDSNMQSVAINMGRAHGILKVTVKGYS--NPYVSGYLGVWVPVISGDQDVTTNASDVVANKEKTFESNAALDSHMIYEDFWMAPFGRSRYNEGY-----------SMTDRYNTIAALHKAGLMN--QMIGFSTNNRGMQIHV-NGQTYANQIYFAYTTGGGGKYPDLFTTKAISTGVAPDPTVRINKWSAQNGTSLQNIGIGLAVKLANGD |
3 | 3qv0A | 0.13 | 0.07 | 2.53 | 0.38 | FFAS-3D | | ---------TQRVGDILQSELKLVETPGKNEAEIVRRTESGETVHVFFDVAQIAFAVNVVISKSEPSFELLMNLQEGSFYVDSATPYPSVDLNQSAEAEITRELVYHGPPFLDEELQESLEA--------YLESRGVN-------------EELASFISAYSEFKENNEYISWEKMKKFFH-------------------------------------------------------------------------------------------- |
4 | 5cqcA1 | 0.12 | 0.08 | 2.87 | 0.69 | SPARKS-K | | YPPETVNKGMNS-SRLHKLYSLFFDKSSAFYL-------GDDVSAYGFQSKKNDQQ-IFLFRPDSDYVAGYHVDAKSDTFILPFVEMPTDIKG-VQHQVLLTISYDPKSKQLTPDSIGRKYRTTTQSIEKAIKSTDFTLGKFTRAAYNTEGNYTFRTIKEVISSSAQGTYLTSQHVQDIESCIKYRNLIESALTEGKTLP------------------------------------------------------------------------- |
5 | 3eh1A | 0.15 | 0.08 | 2.71 | 0.88 | CNFpred | | -----------QAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVTDLLSLANINPDAGFAVQLSIE-TSLVCFQTALLYTSSKGERRIRVHTLCLPVV-------SSLADVYAG----------------VDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGS------------------------------------------------------------------------------------------- |
6 | 5b62A | 0.05 | 0.04 | 1.86 | 0.83 | DEthreader | | VSLKVPDIILFPEFALTGYSFHARKDILPYVTGPSLAISKFCTIIGYPEEDDEQKLYNSALVVNPGIFNYRKTLEMCEENGFQTFPMDFSKRDVTLKASIGDLSYKFMITDKLHNLLEAAKNKIAFALEQLKDMDEPDMVNILRFPFLISILGKTRMP-Y--DT-LEKT---------------FLGTS--------------------FQGKNAILVLANRCGTEDG----------------TTIFAGSSGIYKFNGK---EEVQFE---- |
7 | 2pffB | 0.05 | 0.05 | 2.18 | 1.00 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------ |
8 | 3pcrA | 0.17 | 0.16 | 5.20 | 0.42 | MUSTER | | LWNPTYSRSERQSFQELLTVLEPVYPLPNELGRVSARFSDGSSLRISVTNS---ELVEAEIRTANNEKITVLLESNEQNRLLQSLPLSEDLTDTTSRNLLGFTSKLSTTLIPHNAQTDPLSGPTPSSIFDTCRGLGNAKLSLNVDIPANAQKLLRHDAEQIARESSGSDKQKAEVVEFLCHPEAATAICSAFYQSFNVPALTLTHERRSLDTP--ACINISISQSSDGNIYIAPEDRPNE----GLTN----RTSYEVPQGVKCIIDEETYL- |
9 | 2yadA | 0.12 | 0.03 | 1.16 | 0.63 | HHsearch | | ------------------------------------------------------TTAT--FSIGST--GLVVYDYQQLLIAYKPA-----------PGTCCYI-KIAPESIPSLEALTRKVHNFQ-------------------------ECSLG-AVSTLCGEVP--LYYI----------------------------------------------------------------------------------------------------- |
10 | 5x7oA | 0.07 | 0.07 | 2.78 | 0.54 | CEthreader | | YSGGQTIHYPVNADTWTDVPLFVKQGAIIPNQQVLDYVDQQSVTTVNVDIFPSASETSFTYYEGSSFEQRLAAQDLSSSVRVEVGAGSGSYTPDVQHYVLKIHGRAGSAVTAGGSALTGYGDLQALQAASGSGASGRDIYGDVTYVKLPAASGSATVVEVSGSAPSAATHAIYEVEDASRSGATPTTRAGINTNHSGYSGSGFVDKLDVPGAAVTVYANAELRYANGSGSAARVQQLSLADTGAWSQWGTQTTTLPLTAGQNIITYKYDSDAG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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