Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCSSSHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC MAGAAMAERGRVPPPAPAPSTEGLPRAFLQSLRTLFDILDDRRRGCVHLREIESRWQGTDARELPRGVLEGLRQVAPASGYLTFERFVAGLRTSLLSADGGPRDPTRAPARPGDQPPPPPQRLVFAPADEPRTVLERKPLPLGVRAPLAGPSAAARSPEQLCAPAEAAPCPAEPERSQSAALEPSSSADAGAVACRALEADSGDARRAPRARGERRRHTIASGVDCGLLKQMKELEQEKEVLLQGLEMMARGRDWYQQQLQRVQERQRRLGQSRASADFGAAGSPRPLGRLLPKVQEVARCLGELLAAACASRALPPSSSGPPCPALTSTSPPVWQQQTILMLKEQNRLLTQEVTEKSERITQLEQEKSALIKQLFEARALSQQDGGPLDSTFI |
1 | 4i5lB | 0.08 | 0.07 | 2.82 | 0.62 | CEthreader | | ---------SSQSIPTFYFPRGRPSVNVDAVISKIESTFARFPHERATMDDMGLVAK---ACGCPLYWKGPLFYGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNY-------------------------LVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYL--- |
2 | 4u1cC | 0.06 | 0.06 | 2.61 | 0.75 | EigenThreader | | EFADPIDFIEDEPKEDSDGVKRILGSIFSFVERLDSLLNIDPHSSD---YLIRLRDEQSIYNLILRTQLYFEATLKD------EHDLERALTRPFVKRLDHIYYKSNIIPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQKRAILYNIYYTALNKDFQTAKDMLLTSQVQTNINQFDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLREILHRISLNSSNNASADERARDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIRRSLEHYDKRDYVLFAAKSMQKG----NWRDSVKYLREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKAKLAELFDLPENKVVEVLQSVIAELEIPAEKGDEIT |
3 | 3l4qC | 0.14 | 0.05 | 1.56 | 0.80 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQEKSSKEERFRREGNEKEMQRILLNSERLKSRIAEIHESR------------------------TKLEQELRAQASDNREIDKRMNSLKPDLMQLRKIRDQYLVWLTQ----------------- |
4 | 5wtjA | 0.09 | 0.08 | 3.08 | 0.78 | SPARKS-K | | YLGKLRHNDIDTTVNTDDFSRLHAKEELDLELITFFASTNELNKIFSRENENIDFFGGDREKNYLNSKIKIIRDL----DFIKFTKIGTNERNRILHAISKERDLQG--------------------TQDDYNKVINIIQNLKISD---EEVSKALNLDVVFKD-----KKNIITKINDIKISEENNNDIKYLPSFSKVLPEILNLYRNNPKNEPFDTIETEKIVLNALIYVNKELYKKLILEDFLQELKKTLNIIENYYKNAQISASKGNN------------KAIKKYQKKVIECYIGYLRKNIKKQIKDINDNKTYERITVKTSKTIVINDDSNAVINKIRNRFFATSVWLSEYQNIIDILDELRNECILEEFIQKKEIEKDDDFKIQTKK |
5 | 5j1iA | 0.12 | 0.07 | 2.51 | 0.77 | CNFpred | | --------------------------GLGKGVARLSAEAEK-PTLRSELELTLGKLEQVRSLAIYLEKLKTISLVI--RGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQ-------------------------------------------------------------------------------------------------------AEAQQPTFDALRDELRGAQEVGERLQ-EVERWRERVAQLLERWQAVLAQTD-------VRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM-------------DSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTY--------- |
6 | 7dxjA | 0.09 | 0.05 | 1.95 | 0.67 | DEthreader | | ------AQSVRNSPEF--------QKLLGIAMELFLLCSD--DAESDVRMVADECLNKVIKALMLPLQL-LY--I-----APRSLRAALWRFAELAHLVRPQKCRPY----------------------K--V--L--LF---R--FEP--VIKALKQY-LQ---------CLLDSDQV-----------------------------------------------G-PKGKELETQKEVVVSMLLRILIIILMLLLMISGILLFFLLQVAFTLDNLAMITPLVRERRQD---R--N------------------------------------------WSKLNDLFGDALYQSLPTLARALAQYLVVVHLYQAWSHEKLLLQRLLLTYVRIQK |
7 | 6jciA2 | 0.06 | 0.06 | 2.53 | 0.97 | MapAlign | | ELVEDYHGTKVTEYYRWLEDPDSEETEKLSSRITEVWAFSENDQFFAYGLSTIKFKKAPSGEDLP-DTLERVKFSS----MAWHLFY-NRYLEQSEDVSVLEKLILCYLKDVKNELYVHGLSSGSRMSQLPLEVGSVVGYSGKKKYDEIFYQFTSFLTPGIIYRCDMTTDTYTPKTFREIKVKDFDTSQFETEQVFFPSKDGTKIPMFIVHRKNIRGGGEYGESWHKAGCANKQNVFDDFQSAAQYLIESNGGLLVGACINQRPDLFGCAVAQVGVLDMLRFHKFTIGHAWTTDYGSSDSTDDFKVLIKYSPLHNIREQKDQYPALLLLTVVPLHSLKFLAQIQYTGRIDTKSGHGFGKPTAKVIEELTDIYSFMHQTVGLKW----------- |
8 | 1st6A | 0.11 | 0.11 | 3.93 | 0.69 | MUSTER | | MKIFVTTKNTKSQGIEEALKNNFTVEKMSAEINEIIRVLQLTSWD-RALALIDSKMNQRDPNAPPGDILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRH---GKGDSPEARALAKQIATSLQNLQSKTNRAVANTRPVVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVGPYRQDLLAKCDRVDQLAAQLADLAARGEGESPQARAAAQLQDSLKDLKARMQEAMTQEVSDVFS---DTTTPIKLLAVAATAPSDTPNREEANFE |
9 | 3jvtB1 | 0.21 | 0.04 | 1.37 | 0.64 | HHsearch | | ------------ADKAASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAMLKEA--PGPLNFTMFLSIFSDKLS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 6sl2A | 0.06 | 0.06 | 2.55 | 0.56 | CEthreader | | ---------AMADSELVAQWEKVQIKTFTKWVNMHLAKKGRKINVTTDFKNGVELCALIIGETTIKCVTNPKMRIQMTENLDKALRFIQSVKLTGIGPTDIVDGNVLTLRFAISELSAEGLSAKQGLLLWCQKKCEPYPVKVENFSESFKDGKVFCALIHRHRPDLLDWETVGEDDRANLEKAFDVAEKELGIPKLLDVDDIVNMPRPDERSVMTYVAALYKV--FSSNDQVEKAGKRAGNFLDLLRATEGMVHDYEQRAQALENIEAAINKMNGVEPSDEYHQVKEQINETKNYRKGDRAFIKEQGDLATLFGQINSLRGMKRPVYVAPEGLDPKSLEGYIANISEAERALRSKLNTAMRNCLIALRKAFADPANATDAKINEYRTFVTDETS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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