Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
| | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCSSSCCSSSSSCCCCCSSSSSSCCSSSCCCCCCCCCCCCSSSSSCCCCCCCCCSSSSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC LFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGGGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKEHIHIGEMKQTSQMAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSISVDLDSSLSSTLSNTSKEPSVCEKEALPISESSFKLLGSSEDLSSDSESHLPEEPAPLSPQQAFRRRANTLSHFPIECQEPPQPARGSPGVSQRKLMRYHSVSTETPHERKDFESKANHLGDSGGTPVKTRRHSWRQQIFLRVATPQKACDSSSRYEDYSELGELPPRSPLEPVCEDGPFGPPPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHR |
1 | 4btgA | 0.09 | 0.09 | 3.44 | 1.10 | SPARKS-K | | NLKVGLTQAFAIGELKNQLSVPLQFTRTFSASM---TSELL----WEVGKGNIDLFFQYAQAGGADELVNQFTEYHQSTACKLTAYKADAVPPTAIELFHHITTDFVCHVLSPLPNFYALVDCVRASDLRRMLTALSISQHLANAATTDANAVVSSVLTILGRLWSSTPKELD-PSARLRQRGRAEVIFSDEELSSTIIPWFIEAMSEKLRPINETTSYIGQTSAIDHMGQPSHVQFAKEITAFTPVKLANNSNQRFDVEPGISDRAPIGNTFAVSAYEAVSQRGTVNSNGAEMGFPSVVERDYALDRDPVDESLEARAQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGAYNKPIQPSEVLQAKVLDLANHTTSIHIWPWHEASTEFAYEDAYSIRNKRYTAEVKEF---ELLGLGQRRERTVAHAIIQMWYSWFVEDDRTLAAARRTSRIDGRRMQNAVTLLKIEVDQMVGINRHRIRIWAGLAVMMGLLSRS-EAEALTKVLGDSNALGMV |
2 | 6xuxA | 0.08 | 0.07 | 2.95 | 1.13 | MapAlign | | --DWTVKFAENRSQDGTLLGYSLLQDYINTCM-FDPTTQFYYDVRIEKPLANGCAGKPIVRGKGPEGWSPLFNGAATQANADAVVKVFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGP--IQ--ENYNPLTGAQQGAPNFWSAAHLYMLYNDFFRKQNADNYKNVINRTG-----------APQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAHINGSTTLYTT----YSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNVTTGRWFSGNQTWPWDTWKQAFNPDIAKEN |
3 | 2m38A | 0.29 | 0.05 | 1.42 | 1.77 | HHsearch | | ILSVSAKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKS---NHHYCHVFTAFDVNLAAEIILTLGQAFEVAYQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5wlcLO | 0.07 | 0.07 | 2.99 | 0.43 | CEthreader | | LLSPVGNRVSVFDLINNKSFTFEYEHRKNIAAIDLNKQGTLLISIDEDGRAINFKARNVLHHFNFKEKCSAVKFSPDGRLFALASGRFLQIWKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTWRFILTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWEFTKRKYSWRITKKHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSMRPDGAVSTLKGQISIFNIEDAKQVGNIDCRKDIISGRFNQDRFTAKNS |
5 | 6gmhQ | 0.05 | 0.05 | 2.23 | 0.92 | EigenThreader | | GGG------GGGGGGGGGGG-------------GGGGGGGGG-------GGGGGGG--------GGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKAANGIGAVLAHKREARDVFAQVREADVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARA---LFKCGKL |
6 | 6tgbB | 0.11 | 0.10 | 3.42 | 0.69 | FFAS-3D | | ---IVKVAIKLMEIDQKK-PLSAIIKEV--CDGSLANHEYFALQHADSSNEKNRNEIKLRLTTSPAQNAQQLHERILEALKDLASLSRDVTFAQEFNLDGISLLTQMVESGTELDMLSFTLTAFVELDTFSVAFIKKIASFVNK--SAIDISILQRSLAILESMVLNSHDLY-----QKVAQEITIGQLIPHLQGSDQEIQIAVINALFLKAPDERRQEMANI----------LAQKQLRSIILTHVIRAQRAINNE--------------------------MAHQLYVLQVLTFNLLEDRMMT-------------KMDPQDQAQRDIIFELRRIAFDRDYKKLGFINHVNPAMDFTQTPPKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEIKVGELPSETCNDFHPMFFTHDRSFEEFNKTWKEMFNKVMQVVKEQVMRAEILKIRQSERMNQEDFQSRPILELKEKIQPEILELI-----------KQQRLNRLVEGT----- |
7 | 3j3iA | 0.11 | 0.10 | 3.77 | 1.04 | SPARKS-K | | YDLPGRCYVFNSKPTSEALAMCREYSHVSV----PADAEDVCIVSQGRQIQPGSAV-----TLNPGLVYSSILTYAQEAQIIACSLQENRY--FSRIGLPTVVLYDLMSALEGARLSGDLSKAVGRVHQMLGMVAAKDIISATHMQSRTGFDPSHGIRQYLNS-----NSRLVTQMASKLTGIGLFDATPQMEMDTADYADMLHLTINGEKLLSAGYDVLVEELTLANIRIEHHKMPTGAFTTRVAAKRDSALRLTPRSRTAHRVDMVRECDFNPTMNLKARGSGVKSRRRVSEFRSPPRRESTTTTDLTRRVPIIDEPPAYESGRSSSPVTSQHEEEMGLFDAEAQGEVTAEKNRRIEGREQSDGGLGVREREEWLE-----LVDKTVGVKGLKEVRSIDGIRRHLEEYGEREGFAVVRTLLSGNSKHVRRINQLIRE-----------SNPSAFETEASRMRLRADW--DGDAGSAPVNALHFVGNSPGWKRWLENNNIPSDIQVAGKKRMCS |
8 | 3gb8A | 0.13 | 0.06 | 1.95 | 0.74 | CNFpred | | -------------------------------------------------------------------FIDEILNNINTIICDL-------------PQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVWDSIIQQATKNDILKDPETVKQLGSILKTNVRA----------------------------------CKAVGHPFVIQLGRIYLDMLNVY-----------------------------------------------------------------------------------------------------------------------------------------------KCLSENISAAIQ-------------------------ANGEMVTKQPLI----------RSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNVPREPEVLSTMAIIVNKLG-GHITAEIPQIFDAVFECTLNMIN |
9 | 6um1A | 0.07 | 0.04 | 1.62 | 0.67 | DEthreader | | RSCSLVAVDLICGDARPQNLTLRYSGDLTINFEC---APVFTGE-------------CTYFF------TW--DTKYACVHE-HRVPEDAAVCF-DLES---TAAACVLSRTE------GDNCTVFD--GFS-DLTPLTKKVCGPVDGGRSNAKLQLTITFLCTYACDRYASGVAKTGPLEYTRIHLVTHPILWNTAAACPKDPNSGYVFDLNPLNNSFNVCGDMP-ACGTLD----------------------------------------------------------------------------------------------R-------------------------------------------L---GFITLNYTG-ADAFI---------------KFL--QD-----IDSSLGIR---DT-FF--EF-ETALACVPSPVTPLAVGVQPSLRINLVFLWRCLLSGFTLSVDNENCAN-V------------CFGQTRISVGKAEGGS |
10 | 1vt4I | 0.05 | 0.05 | 2.31 | 1.08 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|