Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CSSSSCCSSSCCCSSSSSSCCCSSSSSSSSSSSSSSSSSSCCSSCCSSSSCCCCCCCSSSSCCCSSSSSCCCCSSSSSSSSSCCCCSSSSSSCCSSCCCCCCSSSSSSCCCCSSSSSSCCCCHHHCSSSSSSSSSCCCSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCSSSSSCCCCSSSSSSSSSCCCCSSSSSSCCSSCCCCCCSSSSSSCCCCSSSSSCCCCHHHCSSSSSSSSSCCCCSSSSSSSSSSSCCCCCCCSSSSCCCSSSSSCCCCSSSSSSSSSCCCCSSSSSSCCSSCCCCCCSSSSSSCCCCCSSSSSCCCCHHHCSSSSSSSSSCCCSSSSSSSSSSSCCCCCCCCCCSSSCCCCCSSSSSCCCCSSSSSSCCCCCCCSSSSSCCCSCCCCCCC KKITFSDVRPNQQEYKISSFEQRLMNEIEFRLERTPVDESDDEIQHDEIPTGKCIAPIFDKRLKHFRVTEGSPVTFTCKIVGIPVPKVYWFKDGKQISKRNEHCKMRREGDGTCSLHIESTTSDDDGNYTIMAANPQGRISCSGHLMVQSLPIRSRLTSAGQSHRGRSRVQERDKEPLQERFFRPHFLQAPGDMVAHEGRLCRLDCKVSGLPPPELTWLLNGQPVLPDASHKMLVRETGVHSLLIDPLTQRDAGTYKCIATNKTGQNSFSLELSVVAKEVKKAPVILEKLQNCGVPEGHPVRLECRVIGMPPPVFYWKKDNETIPCTRERISMHQDTTGYACLLIQPAKKSDAGWYTLSAKNEAGIVSCTARLDIYAQWHHQIPPPMSVRPSGSRYGSLTSKGLDIFSAFSSMESTMVYSCSSRSVVESDEL |
1 | 3b43A | 0.21 | 0.20 | 6.27 | 1.71 | SPARKS-K | | IAWYKEHTKLRSAAYKMQVASLVINKVGEYTCKAENSVGAVASSAVLVIKERK-LPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDAN-LQTSFIH-NVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGNYKMTLVENTGVQEPPRFIKKLEPSRVKQDEHTRYECKIGGSPEIKVLWYKDETEI-QESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE-----PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGK-KYKIMSENF-LTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK------APPRFVKKLSDISTV--VGEEVQLQATIEGAEPISVAWFKDKGEIVRESD |
2 | 3b43A | 0.21 | 0.20 | 6.33 | 1.40 | MUSTER | | TKLRSAPAYKMQFKNNVASL---VINKVDHSDVGEYTCKAENSVGAVASSKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDAN--LQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALEIRPGGNYKMTGVQEPPRFIKKLEPSIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVE-SVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE-----PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENF--LTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK------APPRFVKKLSD--ISTVVGEEVQLQATIEGAEPIVAWFKDKGEIVRESDN |
3 | 3lafA | 0.23 | 0.18 | 5.53 | 2.76 | FFAS-3D | | -----------------------------------------------------RRSLHFVSEPSDAVTMRGGNVLLNCSAESDGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAG-------------------------------PLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPS-GALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGS----NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLV------PPWFLNHPSNLYAYESMDIEFE-CAVSGKPVPTVNWMKNGDVVIPSDY- |
4 | 3b43A | 0.25 | 0.21 | 6.54 | 4.85 | CNFpred | | ASLVINKVDHDVGEYTCKAENSVGAVASSAVLVIKE----------------RKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKD-DANLQTSFI-HNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEH------------------------------EVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVE-NTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE-----PPRFIKKLESRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQE-SSKFRMSFV-ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEP--------PVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKK |
5 | 3b43A | 0.18 | 0.12 | 3.93 | 0.83 | DEthreader | | AK----------------RPGGNYKM---------------------TKGDAVEPPRFIKKLEPSRIVKQDEHTRYECKI-GGSPEIKVLWYKTEIQE--SSKFRMSFVE-SVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEP--------------------------------PVFRK-KPHPVETLK-GADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK----APPRFVKKLSDISTVVG-EEVQLQATIEGAEPISVAWFK--DKGEIVREDNIWISYSENIATLQFSRAEPANAGKYTCQIKNAGTQECFATLSVLE-------------------------------------------------------- |
6 | 1qz1A | 0.23 | 0.15 | 4.59 | 1.63 | SPARKS-K | | -------------------------------------------------------VLQVDIVPSQGEISVGESKFFLCQVAGDAKKDISWFSNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGQSEATVNVKIFQ---------------------------------KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY--LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPRQ------SIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEDDEKHIFSDDSSE--LTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK------------------------------------------------------ |
7 | 3b43A | 0.23 | 0.20 | 6.33 | 0.92 | MapAlign | | --IEPLEHVEAAIGEPITLQCKVFKNNVASLVIVDHNSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKD-DANLQTSF-IHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEH------------------------------EVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTL-VENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ-----EPPRFIKKLPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQE-SSKFRMSF-VESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEEEVQLQATIEGAEPISVAWFKDPANAGKYTCQIKNEAGTQECFATLSVLE----- |
8 | 3b43A | 0.24 | 0.19 | 5.78 | 0.56 | CEthreader | | ----------------------------------------------------AMEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPA--YKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERK------------------------------LPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSF-IHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSE--HEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVE--NTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGV-------QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSK |
9 | 3lafA | 0.25 | 0.19 | 5.95 | 1.36 | MUSTER | | -----------------------------------------------------RRSLHFVSEPSDAVTMRGGNVLLNCSAESDGVPVIKWKKDGLILALGMDD-RKQQLPNG--SLLIQNILKPDEGLYQCEASLGDSGSIISRTAKVMV-------------------------------AGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPDSRVVVLPSG--ALQISRLQPGDSGVYRCSARNPASTRTGNAEVRILSDPGLHRLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGG----SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLV------PPWFLNHPS--NLYAYESMDIEFECAVSGKPVPTNWMKNGDVVIPSDYF |
10 | 3b43A | 0.21 | 0.20 | 6.39 | 0.70 | HHsearch | | RIAWYKEHTKNVASLVINKVD--HSDVGEYTCKAENSVGAVA-SSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANL-QTSF-IHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDALGESGTFKCTCYASNVAAQLGVQEPPRFIKKLPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSF-VESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK-----EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKK-YKIMSE-NFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAP------PRFVKKLS--DISTVVGEEVQLQATIEGAEPISVAWFKDKGEIESDNI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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