Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC MAFLMKSMISNQVKNLGFGGGSEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQKCSVM |
1 | 6sx5A | 0.07 | 0.07 | 2.85 | 0.43 | CEthreader | | WNLFDFVIVAIALMPAQGSLSVLRTFRIFRVMRLVSVIPTMRRVVQGMLLAL-PGVGSVAALLTVVFYIAAVMATNLYGATFPEWFGDLSKSLYTLFQVMTLESWSMGIVRPVMNVHPNAWVFFIPFIMLTTLTLNLFIGIIVDAMAITKEQEEEAKTGH |
2 | 6b8hb | 0.10 | 0.10 | 3.70 | 0.50 | EigenThreader | | SAAAVIYAISNEESILLLTFLGFTGLVAKYLAPAYKDFADARMKKVSDVLNASRNKHVEAVDRIDSVSQLQNVAETTKVLFDVSKETVELESEAFELKQKVELAHEAKAVLDSWVRYEASLRQLEQRQLAKSVISRVQSELGQEKVLQQSISEIEQLLSK |
3 | 1kilE | 0.34 | 0.08 | 2.43 | 0.95 | FFAS-3D | | ---------------------------------------------EERQEALRQAEEERKAKYAKMEAEREVMRQGIRDKYGI----------------------------------------------------------------------------- |
4 | 4uosA | 0.15 | 0.14 | 4.82 | 0.82 | SPARKS-K | | MIEEIKKMLEKAIKKVKEMLEKKKMLENGEDS---------EKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKLGVDEEIKKMLEKAIKKVKMLEKMIKEIKKMLENGEDSEKILKKAKEMAEELAEKILKKAKEMAEKILKKVKELGVG- |
5 | 4tqlA | 0.16 | 0.14 | 4.76 | 0.60 | CNFpred | | EMKKLYDEAKKKIEQMIQQIKQGGDKQKMEEL------KRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKME-----------KLLKEMKQRMEEVK--DELLEKIKKNIDDLKK-IAEDLIKKAEENIKEAKKIAEQLVKRA |
6 | 6r9tA | 0.09 | 0.07 | 2.83 | 0.83 | DEthreader | | SDKQRLEHAAKQAAAIPLQG---LPGETMECTQDLGTTLNRV----SSSKLLAAARAVTDSINQIKECDIQARALAVNP--RDPWSLAGHSRTVSDSIKLISMRDKAP-GQ-LECETAIAALNSCLRDLDQASLAAVSQ--------------------- |
7 | 3jcoR | 0.06 | 0.06 | 2.52 | 0.66 | MapAlign | | KEAAEFVLAKIKEEEYLVNNGQSDLEHDEKSDSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTYGIHCLAVRNFKEAAKLLVDFTSIELTSYESIATYASVTGLFTLERTDLK |
8 | 2otoB | 0.11 | 0.09 | 3.38 | 0.67 | MUSTER | | --------------------AANNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKLELAIDQASQDYNRANVLEKE----- |
9 | 1kilE | 0.32 | 0.08 | 2.45 | 2.51 | HHsearch | | ------------------------------------------KKEEERQEALRQAEEERKAKYAKMEAEREVMRQGIRDKYGI----------------------------------------------------------------------------- |
10 | 5yfbA2 | 0.09 | 0.09 | 3.36 | 0.43 | CEthreader | | FQEGADGKLNFDPEKVINPLTGKPITSWYKPGQTPDSVLVSNLDILKIFNYVDKQDIEDIQYITFLLMARAGLRALEFYDPATKKHGQAHMQARMGITQYLIQAGIARLELIQDANGELENLYVRVDREKVLSKGKEVVGQLLIELQVRKSTADGTGSRD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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