Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHSCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MALLVDRVRGHWRIAAGLLFNLLVSICIVFLNKWIYVYHGFPNMSLTLVHFVVTWLGLYICQKLDIFAPKSLPPSRLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFGEGGIFGPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFKLSEQEGSRSKLAQRP |
1 | 6ukjA | 0.12 | 0.11 | 3.97 | 1.33 | DEthreader | | ------EIKDNIFIYILSIIYLSVSVMNTIFAKRTLNKIGNYSFVTSETHNFICMIMFFIVYSLFG---HRSFNLQFFAISMLDACSVILAFIGLTRTTGNIQSFVLQLSIPINMFFCFLILRYRYHLYNYLGAVIIVVTIALVEMLSFEENSIFNLVLISSLIPVCFSNMTREIVFKKYKIDILRLNAMVSFFQLFTSCLILPVYTLHLPETNIGACLCDGAWKTFALFSFFDICDNLITSYIIDKFSTMTYTIVSCIQGPALAIAYYFAVVREPRLLDFVTLFGYLFGSIIYRVGNIILERKKMRN----- |
2 | 5y78A | 0.15 | 0.14 | 4.74 | 2.31 | SPARKS-K | | ----SPTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWK-YPWVLSTIQLGVGALYCTFLWVLGLRTKPNVSIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAKLP----------- |
3 | 5y78A | 0.15 | 0.14 | 4.82 | 1.47 | MapAlign | | -----PTLVHTLKVGFYFFLWYFFNFIFNIANKRTLN--MWYPWVLSTIQLGVGALYCTFLWVLGLRTKPNVLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAKL------------ |
4 | 5y78A | 0.15 | 0.15 | 4.92 | 0.98 | CEthreader | | ----SPTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKY-PWVLSTIQLGVGALYCTFLWVLGLRTKPNVLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFTLIAQNTYALITIISFFMELPFALLMEGFPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAKLP----------- |
5 | 5y78A | 0.15 | 0.14 | 4.83 | 1.64 | MUSTER | | ----SPTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKY-PWVLSTIQLGVGALYCTFLWVLGLRTKPNVLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAKLP----------- |
6 | 5y78A | 0.16 | 0.15 | 4.91 | 4.06 | HHsearch | | ----SPTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNM--WKPWVLSTIQLGVGALYCTFLWVLGLRNVSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKLIAQNTYALITIISFFMELPFALLMEGFPPLVSIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAKLP----------- |
7 | 5y78A | 0.15 | 0.15 | 4.92 | 3.57 | FFAS-3D | | ----SPTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKY-PWVLSTIQLGVGALYCTFLWVLGLRTKPNVSIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAK-----------LP |
8 | 6ukjA | 0.11 | 0.11 | 3.82 | 2.20 | EigenThreader | | VFKLIFKEIKDNFIYILSIIYLSVSVMNTIFAKRTLNKIGNYSFVTSETHNFICMIMFFIVYSLFG---HRSFNLQFFAISMLDACSVILAFIGLTRTTGNIQSFVLQLSIPINMFFCFLILRYRYHLYNYLGAVIIVVTIALVEMKQEENSIIFNLVLISSLIPVCFSNMTREIVFKKYKIDILRLNAMVSFFQLFTSCLNIKNGFACLFLGRNTVDDCDGAWKTFALFSFFDICDNLITSYIIDKFSTMTYTIVSCIQGPALAIAYYFKVVREPRLLDFVTLFGYLFGSIIYRVGNIILERKKMRN----- |
9 | 5y78A | 0.16 | 0.14 | 4.80 | 1.82 | CNFpred | | -----------LKVGFYFFLWYFFNFIFNIANKRTLNMW-KYPWVLSTIQLGVGALYCTFLWVLGKPNVSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVD-TLIAQNTYALITIISFFMELPFALLMEGFPPLVSAAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAKL------------ |
10 | 5y78A | 0.14 | 0.13 | 4.56 | 1.33 | DEthreader | | ---SPT-LVHTLKVGFYFFLWYFFNFIFNIANKRTLNM-WKYPWVLSTIQLGVGALYCTFLWGLRTKPNVSKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKLIAQNTYALITIISFFMELPFALLMEG---F-PPLVSSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFISTIAIIGTMLYSLAKA-KL--P--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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