Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCSSSSCCCCCCCCCCCCCSSSCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC VVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD |
1 | 6e1jA | 0.08 | 0.08 | 3.06 | 0.43 | CEthreader | | KTVGNEVDEETGYIPVICVIARSKERDIKAAWESVKYAKRPRIVIFTSTSDIHLKYKLKMTREEVVDMVASSIRFAKSLGFEDIEFGCEDGGRSDKDYICTVFEEAIKAGATTLACPDTVGINMPHEYGKLVRYIKANTPGIDDVIFSAHCHNNGIGERSGNAPLEEVVMALKCRGAFVMGGVYTRIDTRQIMATSKMVQEYTGLPHKPIVGANCFVHESGIHQDGILKNRSTYEIISPEDVGVVKSQN |
2 | 1e3mA | 0.07 | 0.06 | 2.69 | 0.72 | EigenThreader | | PGTISNLLAAI---WQDSKGFGYATLDIS-----SPADRETAAELQRTNWEFE----IDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQRATRRNLETPGLERQQTIGALQDFTAGLQPVLRQPVQALREKLRDLLERAIIDTPPVLVRDGGVIASEYEDKVLTSKGKALALEKQLYEELSASALAELDVLVNLAERAYTLNYTCPTEYSEIGRGTSTYDGLSLAWACAENLANKIKA |
3 | 3nrkA2 | 0.08 | 0.06 | 2.34 | 0.74 | FFAS-3D | | ----NRVIATVGTV----------SISELDLDDATDYRKSFRTRIIDFLIDR-------AIVDVVAEEESIQVN----------------EQRVDSEIEKRMEV-MGITNRKQFEKTMETSSMPFELWVTELPYQIKKGQLLQL-------------KIAVPPPNEQEIRSWYNQNKDKVGPTPMENLRGGIDKEEDTFHRWLKESRAE--------------------IPIQIFDEAYRKENKIPLKE |
4 | 6w2vA | 0.11 | 0.08 | 3.04 | 0.71 | SPARKS-K | | --------------------------------ATDKEEVIEIVKELAELAKQSTDPNLVAEVVRALTEVAKTSTD---------------TELIREIIKVLLELASKLRDVAELARELAEKTGDP-IAKECAEAVSAAAEAVKKAADLLKRHPGS------------EAAQAALELAKAAAEAVLIACLLALDKCIKAASEAAEEASKAAQRHPDSQKARDEIKEASQKAEVKERCERAQEHPNAGWLE |
5 | 4iggA | 0.07 | 0.04 | 1.82 | 0.59 | CNFpred | | ----------------------------RDLRRQL------RKAVMDHVSDSFLE--TNVPLLVLIEAAK-----------------NGNEKEVKEYAQVFREHAN---KLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENFKEQWEKQVRVLTDAVDDSIDDFLAVSENHILEDVNKCVIALQEKDVDG------------------------------------ |
6 | 6m32A | 0.06 | 0.05 | 2.10 | 0.83 | DEthreader | | LGVMWFPIDFQT----------INSET-MS------GINIALGCIAFVAFQQPS---FA--PY-YKE---LDKLV-SGEA------GM-ARVVTNLIVFNHIICGVLYVFAGVYGGIWITKGRDQEVQVKILGTVMALCFATMLSVYAVIVWN---ELNITSFYWLKPLPIF-QWMFAD----DVMAHVITAGSLFSLIALVRIAFFTSPLWDDLGLK-------CLGTCGVSQTISDSKLAGTFL-G- |
7 | 1e3mA | 0.08 | 0.08 | 3.02 | 0.74 | MapAlign | | LFYRGDFYELAKKRGASAGEPIPAGIPYHAVENYDEALLQERQDNLLAAATLDISSGRFRLSLYAERRRPLWERDLVGFGVENAPRGLCAAGCLLQYAKDTVTPGSRLKRWLLERQQTIGA---------LQDFTAGLQPVLGDLERILYYIQISRTLKNAERYIIPELKEYEDKVLTSKHLEALQQSASALAELDVLVNLAERGSYVPAQKVEIGPIDRIFTRVGFVETETANILHNATEYSLVLDEI |
8 | 5cwmA | 0.11 | 0.10 | 3.47 | 0.51 | MUSTER | | --DPEDELKRVE-EAEELLRQAKEKGSEEDLEKALRTAEEA-AREAKKVLEQAEKEGDPEVALRAVELV--------------VRVAELLLRIAKESEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELA--G-DPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER----------- |
9 | 2pffB | 0.15 | 0.14 | 4.59 | 0.85 | HHsearch | | QGNTDDYFEEL------RDLYQTYHVLVGDLIK-------FSAETLSELIRTTLDA--EKVFT-----QGLNIPSNTDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGETDSWESF--FVSVRKAITVLFFIGVRCYEA--YPNT-SLPPSILEDSLESPMLSISNLTNSHLPAGKQVEINLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERRFLPVASPFHSKNVSFNAKD |
10 | 6gmhQ | 0.06 | 0.06 | 2.63 | 0.43 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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