Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
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| SS Seq | CCCHSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCSSSSSSSCCCHHHHHHHHHHHHHHHCCCCCCSSSSSSSCCCCCCHHHHHHHHHHHHCCCCSSSSSCCCCCCHHHHHHHHHHHCCCCSSSSSCCCSSSCCCHHHHHHHHHHHCCCSSSSSSSSSCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCSSSSSSCCCSSSSSHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCSSSSSCCSSSSSSCCCC MRNAIIQGLFYGSLTFGIWTALLFIYLHHNHVSSWQKKSQEPLSAWSPGKKVHQQIIYGSEQIPKPHVIVKRTDEDKAKSMLGTDFNHTNPELHKELLKYGFNVIISRSLGIEREVPDTRSKMCLQKHYPARLPTASIVICFYNEECNALFQTMSSVTNLTPHYFLEEIILVDDMSKVDDLKEKLDYHLETFRGKVKIIRNKKREGLIRARLIGASHASGDVLVFLDSHCEVNRVWLEPLLHAIAKDPKMVVCPLIDVIDDRTLEYKPSPLVRGTFDWNLQFKWDNVFSYEMDGPEGSTKPIRSPAMSGGIFAIRRHYFNEIGQYDKDMDFWGRENLELSLRIWMCGGQLFIIPCSRVGHISKKQ |
1 | 6iwqA1 | 0.40 | 0.30 | 8.90 | 1.00 | DEthreader | | ------------------------------------------P----------------------------------VVGGPG--L-LGPEFKAINMVASDMISL-DR-----SVNDLRQEE-CKYWHYDENLLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKEKLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKAKGQVLIYLDAHCEVAVNWYAPLVAPISKDRTICTVPLIDVINGNTEIIPQGGGYARGAWDWMLWKRVPLTPQEKR-RKTKTEPYRSPAMAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLE |
2 | 6s22A1 | 0.38 | 0.33 | 9.67 | 2.03 | SPARKS-K | | ----------------------------------HCLPGHYTPVELKPFLDRPLQDPNAPGASGKAFKTINLNS-------------EEQKEKQAGEEKHCFNAFASDRISLHRDLGPTRPPECIEQKFCPPLPTTSIIIVFHNEAWSTLLRTVHSVMYTSPAILLKEIILVDDASVDEYLHDKLDEYVKQFQ-IVKVVRQKERKGLITARLLGASVATGETLTFLDAHCECFYGWLEPLLARIAENPVAVVSPDIASIDLNTFEFSKPSPYGHSHNRGNFFGWESLPKHENKRRKDETYPIRTPTFAGGLFSISKDYFEYIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIMPCSVVGHVFRS- |
3 | 6iwqA | 0.41 | 0.34 | 9.91 | 0.92 | MapAlign | | -------------------------------------------------------------------EPPGVVGGPGEKAKPLVLGPEFKQAIQASIKEFGFNMVASDMISLDRSVNDLRQEECKYWHYDENLLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKEKLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKALGQVLIYLDAHCEVAVNWYAPLVAPISKDRTICTVPLIDVINGNTYEIIPQGYARGAWDWSMLWKRVPLTPQEKRLRKTKTEPYRSPAMAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRL- |
4 | 6iwqA1 | 0.38 | 0.34 | 10.14 | 0.64 | CEthreader | | --------------------------------------YLTFKPQTFTYHDPVLRPGILGNFEPKEPEPPGVVGGPGEKAKPLVLGPEFKQAIQASIKEFGFNMVASDMISLDRSVNDLRQEECKYWHYDENLLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKEKLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKALGQVLIYLDAHCEVAVNWYAPLVAPISKDRTICTVPLIDVINGNTYEIIPQGYARGAWDWSMLWKRVPLTPQEKRLRKTKTEPYRSPAMAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLE |
5 | 6s22A1 | 0.40 | 0.34 | 10.11 | 1.86 | MUSTER | | ----------------------------------HCLPGHYTPVELKPFLDRPLQDPNAPGASGKAFKTINLNS-------------EEQKEKQAGEEKHCFNAFASDRISLHRDLGPTRPPECIEQKFCPPLPTTSIIIVFHNEAWSTLLRTVHSVMYTSPAILLKEIILVDDASVDEYLHDKLDEYVKQF-QIVKVVRQKERKGLITARLLGASVATGETLTFLDAHCECFYGWLEPLLARIAENPVAVVSPDIASIDLNTFEFSKPSHNRGNFDWSLSFGWESLPKHENKRRKDETYPIRTPTFAGGLFSISKDYFEYIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIMPCSVVGHVFRS- |
6 | 6iwqA | 0.40 | 0.35 | 10.36 | 3.24 | HHsearch | | -------------------------YLTFKPQTFTYHDPVLRPGILGNFEEPPPGVVGGPGEKAKPLVLGPEFK----------------QAIQASIKEFGFNMVASDMISLDRSVNDLRQEECKYWHYDENLLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKEKLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKAKGQVLIYLDAHCEVAVNWYAPLVAPISKDRTICTVPLIDVINGNTYEIIPQGYARGAWDWSMLWKRVPLTPQEKRLRKTKTEPYRSPAMAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLE |
7 | 6s22A1 | 0.41 | 0.35 | 10.25 | 2.80 | FFAS-3D | | --------------------------------------GHYTPVELKPFLDRPLQDPNAPGASGKAFKTINLNSEEQ-------------KEKQAGEEKHCFNAFASDRISLHRDLGDTRPPECIEQKFKPPLPTTSIIIVFHNEAWSTLLRTVHSVMYTSPAILLKEIILVDDASVDEYLHDKLDEYVKQF-QIVKVVRQKERKGLITARLLGASVATGETLTFLDAHCECFYGWLEPLLARIAENPVAVVSPDIASIDLNTFEFSKPSHNRGNFDWSLSFGWESLPKHENKRRKDETYPIRTPTFAGGLFSISKDYFEYIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIMPCSVVGHVFRS- |
8 | 6iwqA | 0.32 | 0.28 | 8.49 | 1.25 | EigenThreader | | ------------------------------------YLTFKPQTFTYHDPVLRPGILGNFEPKEPEPVGGPGEKA-----KPLVLGPEFKQAIQASIKEFGFNMVASDM--ISVNDLRQEECKYWHYDEN--LLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKEKLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKALGQVLIYLDAHCEVAVNWYAPLVAPISKDRTICTVPLIDVNTYE--IIPQGGGDEDGYAWDWSMLVPLTPQEKRLRKTKTEPYRSPAMAG-GLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLE |
9 | 6pxuA | 0.46 | 0.35 | 10.07 | 2.60 | CNFpred | | -----------------------------------------------------------------------------------------LRLQEESVRLHQINIYLSDRISLHRRLPERWNPLCKEKKYDYNLPRTSVIIAFYNEAWSTLLRTVYSVLETSPDILLEEVILVDDYSDREHLKERLANELSGL-PKVRLIRANKREGLVRARLLGASAARGDVLTFLDCHCECHEGWLEPLLQRIHEEESAVVCPVIDVIDWNTFEYLG-EPQIGGFDWRLVFTWHTVPERERIRMQSPVDVIRSPTMAGGLFAVSKKYFEYLGSYDTGMEVWGGENLEFSFRIWQCGGVLETHPCSHVGHVFPKQ |
10 | 6iwqA | 0.40 | 0.30 | 8.90 | 1.00 | DEthreader | | ------------------------------------------P----------------------------------VVGGPG--L-LGPEFKAINMVASDMISL-DR-----SVNDLRQEE-CKYWHYDENLLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKEKLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKAKGQVLIYLDAHCEVAVNWYAPLVAPISKDRTICTVPLIDVINGNTEIIPQGGGYARGAWDWMLWKRVPLTPQEKR-RKTKTEPYRSPAMAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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