Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHCCCCCCCCCCCCCCSSCCSCCCCCCCCCSSSSCCCCCCCCHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCSSSCCCCCCCCCCCSSCCCCCSSSSCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCSCCCCCCSSSSCCCCCSSSSCCCCCSSSCCCCCSCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSSHHHHCCCCCCCCCCC MGSAGRLHYLAMTAENPTPGDLAPAPLITCKLCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECPSCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAEAPIKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLDNDIFLRHYDKGPCRNKLGHSRASVMWNRTQVVGILVGLGIIALVTSPLLLLASPCIICCVCKSCRGKKKKHDPSTT |
1 | 6gmhQ | 0.08 | 0.06 | 2.25 | 0.83 | DEthreader | | -------------------GGGGG---------YPNNYE-MK-----EQYPDDVEAWIELAQILETDIQALSYGTA--------TRILQEKVADVPPEILNNVGALHFRGNLGE---------YNARLYEAMC---------EFHEAEKYRLGAMARDKGNFYE-----L-LAKQVLQTLHQPTRDR--------TEVLYRFKCGK--TLARHVAVLFNVA-V--RKELELAHRYFSYLSKAAARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLRKEEKLLE |
2 | 5edvA | 0.20 | 0.17 | 5.41 | 3.32 | SPARKS-K | | -----------------------------CAVCGWALPM---QALTSCECTICPDCFRQHFTIALKEKHITDMVCP--ACGRPDLTDDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCA--QCSFGFIYERE----QLEATCPQCHQTFCVRCKRQWHRGRSCEDFQNWNDPEYQAQGLAMYLQENGIDCPKCKFSYAARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCP--EPNCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDCRVIEQKEVPNGLRDEACGKETPGLCQAHYKE |
3 | 4kblA | 0.21 | 0.19 | 6.20 | 1.32 | MapAlign | | VLTAEQILQHMVNWDKEKLMERYFDGNMPCQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIMEEGMQTISCPAHGC--DILVDDNTVMRLITDKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYP---DAKPVRCKCG-RQFCFNCGENWHDPVKCKWLKKWI---------KKCIAANTKECPKCHVTIEKDGGCNHMVCRNCKAEFCWVCLGPWEWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDK |
4 | 4kblA | 0.22 | 0.21 | 6.56 | 1.03 | CEthreader | | PATITRILLSHFNWDKEKLMERYFDGNMPCQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIMEEMGQTISCPAHGCDI--LVDDNTVMRLITDKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYP----DAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKC---------IAANTKECPKCHVTIEKDGGCNHMVCQNCKAEFCWVCLGPWEPHGSAWYNCNRYNRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEWIEVQFLKKAVDVLCQCRATLMYTY |
5 | 5edvA | 0.23 | 0.18 | 5.81 | 1.89 | MUSTER | | -----------------------------CAVCGWALP---MQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCA--QCSFGFIY----EREQLEATCPQCHQTFCVRCKRQWHRGRSCEDFQNWKDPEYQAQGLAMYLQENGIDCPKCKFSYAARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSLHGHHPRDLFYLRDW---------------TALRLQKLLQ--CRVIEQKEVPNGLRDKETP |
6 | 5c1zA | 0.21 | 0.16 | 5.03 | 3.37 | HHsearch | | PGTSAEFFFKSKETSVALHLIATNSRNITCITCTDVRSPVLVFQC-NSRHVICLDCFHLYCVTRLNDRQFYSLPCVA-GCPNS-LIKELHHFRILGEEQYNRYQQYGAEECVLQMGGV-LCPRPGCGAGLLPEP----DQRKVTCEGNGFAFCRECKEAYHEG-ECSAVFEYRV-DERAAEQARWEA-TTKPCPRCHVPVEKNGGCMHMKCPQCRLEWCWNCGCEWNRVCMGDHWFDV----------------------------------------------------------------- |
7 | 5edvA | 0.22 | 0.17 | 5.52 | 1.64 | FFAS-3D | | -----------------------------CAVCGWALPMQA---LTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQCSFGFI------YEREQLEATCPQCHQTFCVRCKRQWERGRSCEDFQRMNDPEYQAQGLAMYLQENGIDCPKCKFSALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSHGHHPRDCLFYLRDWTALRLQKLL----------------------QDCRVIEQKEVPN-- |
8 | 4kblA | 0.15 | 0.14 | 4.64 | 1.03 | EigenThreader | | WDKEKLMERYFDGNMPCQICYLNYPNSYFTGLECGHKFC-----------------MQCWSEYLTTKIMEMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWPAPDCHHVVKVQ---YPDAKPVRC-KCGRQFCFNCGENWHDPVKCKWLK-------KWIKKCIAA--NTKECPKCHVTIEK-DGGCNHMVCNCKAEFCWVCLGPWEPHGSAWYNCNRYNRSRAALQRYLFYCNRYMNHMQSLRFEHKQSIIFENNQADLENATEVLSGYLERDISQDSLQDI |
9 | 4kblA | 0.27 | 0.22 | 6.80 | 3.00 | CNFpred | | ---------------------------MPCQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIMEEMGQTISCPAHGCD--ILVDDNTVMRLITDKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYP---DAKPVRCK-CGRQFCFNCGENWHDPVKCKWLKKWI------------IAANTKECPKCHVTIEKDGGCNHMVCRNCKAEFCWVCLGPWEPHG----SAWYNCNRY-ALQRYLFYCNRYMNHMQSLRFE-QFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQSIIF |
10 | 5u1sA | 0.05 | 0.04 | 1.85 | 0.83 | DEthreader | | ---------EDITTVDILASSIIFNLFNLEI-NVLISN-------IEFSFNVYCMLRNDTLSFVF-D-----FCQNAHCFTIFLYGSEWSLSLHLLNKYELLIRIVYLLNLDMSKHLTTLSKITKLY-L-EPIYGKANKAFDYL------DAEADITSL--EFVKLEQSLVYFLEKTFL--N-------LWKLHLGKDICLSEYM---PKN-----VINRVHNMWQHELSKISLSSLTLIL-IHNSSLITNFSLDSASYVCLNKLLSRFLPLQVTIEDNIIIDAKPSS--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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