Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
| | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCSCCCCCCCCCCCCCCCCCCC MSRQLNIKSSGDKGNFSVHSAVVPRKAVGSLASYCAAGRGAGAGFGSRSLYSLGGNRRISFNVAGGGVRAGGYGFRPGSGYGGGRASGFAGSMFGSVALGPACLSVCPPGGIHQVTVNKSLLAPLNVELDPEIQKVRAQEREQIKVLNDKFASFIDKVRFLEQQNQVLETKWELLQQLDLNNCKKNLEPILEGYISNLRKQLETLSGDRVRLDSELRSMRDLVEDYKKRYEVEINRRTTAENEFVVLKKDADAAYAVKVELQAKVDSLDKEIKFLKCLYDAEIAQIQTHASETSVILSMDNNRDLDLDSIIAEVRMHYEEIALKSKAEAEALYQTKIQELQLAASRHGDDLKHTRSEMVELNRLIQRIRCEIGNVKKQRASLETAIADAEQRGDNALKDAQAKLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLEGEECRMSGENPSSVSISVISSSSYSYHHPSSAGVDLGASAVAGSSGSTQSGQTKTTEARGGDLKDTQGKSTPASIPARKATR |
1 | 6yvuB | 0.13 | 0.08 | 2.77 | 1.28 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------ILQGEVENI-AQMKPKLEDIIEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKETALEEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVEKAEKTLKSTKHSISEAENMLE-------ELRGQQTEHETEIKDLTQLLEKERSILDDIKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSL---------------------------------------------------------------------------- |
2 | 6yvuB | 0.09 | 0.09 | 3.35 | 1.22 | SPARKS-K | | SSGTSRIDEEKPGLIITRKAFKNNSSKYYINEKESSYTEVTKLLKNEGIDLDHKRFLILQGEVENIAQMKPKAEKESDDGLLEYLEDIIGTANYKPLIEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKSLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSL-------KDKTKNISAEIIRHEKELKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSRLDVAISTAVECAQHCIDYLRKNKLGYARFILLDRLRQFNL------------QPISTPENVP-------RLFDRDTLVAQVAYGKKRFRVVTVDG |
3 | 2tmaA | 0.12 | 0.07 | 2.32 | 1.27 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRS----------------KQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQK------------------DEEKMEIQEIQLKEHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEE----EIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI------------------------------------------------------------------------- |
4 | 6yvuA | 0.08 | 0.08 | 3.09 | 1.11 | MapAlign | | --NILDAICFVLGIASMSTVRASSLQDLIYKRGQAGVTKASVTIVFDNTDKSNSPIGFTNSPQISVTRQGTSKYLINGHRAPQQSVLQLFQSVQLNINNPNFLIMQGKITKVLNMKPSEILSLIEEAAGTKMFEDRREKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDANPSSQIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNNMEKIIEDETISKLNEYKRETLVKTWEKVTLDFGNIFADLLPNSFAKLVPCEGKDVTQGLEVKVKLGNIWKESLIELSGGQRSLIALS |
5 | 6tpiA | 0.09 | 0.05 | 1.90 | 1.86 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKSIQADIAAKERAVRQKQQQRASLLAQLKKQEE-------AISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFG-----YLNQARQET----IAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAR----------EAQAVRDR-QKEAT-RKGTTYKPTGGLGAPRGQAFWPVR--GPTLHRYGEQLQGELRWKGMVIGAKAIADGRVILADWLQGYGLVVVLYGYN |
6 | 6yvuA | 0.12 | 0.07 | 2.60 | 1.25 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------QGTSKYLINLQLFQSVQLNINKMFEDRREKAERTMSKKETKLQENRTLTEEIEPKLEKLRNEKRMFLE----------FQSTQTDLEKTERIV--VSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKLENKENGLLNEISRLKTSKVENLNDTTEKSKA--------------LESEIASSSAKLIEKKSANTEKDYKMVQEQLSKQRDLYKRKEELVSTYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEDNELNVKHVKQCQETCDKLRARLVEYGFDPSRIKDLKQREDKLKSHYYQTCKNSEYLKRR-------------------------------------------------------------------------- |
7 | 5j1iA | 0.08 | 0.05 | 1.94 | 1.21 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------------------------------------------------SRCQRCISELKDIRLQLEACETRTVHRLR---LPLDKEP----ARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGEVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLESVIQEYVDLRTHYSELTTLTSQYIKFISET---------------------------------------------------- |
8 | 5j1iA | 0.12 | 0.07 | 2.60 | 1.19 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------SELKDIRLQLEACETRTVHRLRLLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKV--SPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQ-ATLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEVE----RWRERVAQLLERWQAVLTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQA-SQAVREQLRQEQALLEEIER-HGEKVEECQRFAKQYINAIKDYELQLVTYK-GSESVIQEYVDLRTHYSELTTLTSQYIKFISET-------------------------------------------------------------------------------- |
9 | 6tpiA | 0.07 | 0.04 | 1.72 | 1.20 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQLDAA------FRQGHTGIQLILSGEESQRGQR---LQAYFGYLNQARQETIAQLKQTREEVAMQ-RAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQQGQQQLS-------ELRANESRLRNSIARAEAAAKARAEREAREAQAVRD----R-QKEATRKSEKSLMSR-TGGLGAPRQAFWPVRGPTLHRYGEQLQGEGVIGASEGTE--VKAIADGRVILAWLQGYGLVVVVEHGKLYGYNQSALVSV |
10 | 4zryA | 0.35 | 0.07 | 2.15 | 1.20 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTTEIDNNIEQISSYKSEITELRRNVQALEIELQSQLALKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQIRAETECQNTEYQQLLDIKIRLENEIQTYRSLLEGE-------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|