Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHHCCCCSSSCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCSSSSSSCCCCHHHHHHHHHCCCCCCSSSSSSSCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCSSSSSHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCC MEKGLTLPQDCRDFVHSLKMRSKYALFLVFVVIVFVFIEKENKIISRVSDKLKQIPQALADANSTDPALILAENASLLSLSELDSAFSQLQSRLRNLSLQLGVEPAMEAAGEEEEEQRKEEEPPRPAVAGPRRHVLLMATTRTGSSFVGEFFNQQGNIFYLFEPLWHIERTVSFEPGGANAAGSALVYRDVLKQLFLCDLYVLEHFITPLPEDHLTQFMFRRGSSRSLCEDPVCTPFVKKVFEKYHCKNRRCGPLNVTLAAEACRRKEHMALKAVRIRQLEFLQPLAEDPRLDLRVIQLVRDPRAVLASRMVAFAGKYKTWKKWLDDEGQDGLREEEVQRLRGNCESIRLSAELGLRQPAWLRGRYMLVRYEDVARGPLQKAREMYRFAGIPLTPQVEDWIQKNTQAAHDGSGIYSTQKNSSEQFEKWRFSMPFKLAQVVQAACGPAMRLFGYKLARDAAALTNRSVSLLEERGTFWVT |
1 | 2z6vA | 0.16 | 0.09 | 2.91 | 0.67 | DEthreader | | ------------------------------------------------------------------------------------TTADDVFKA-EIDSDRLQVHAYIQDHP--E-----------D--APVERPLIVLGMPRTGTTVISYLLDQDPARRSLPTEDMFIHNQDFKWDRYAWLEADMSSTYEYQKRYL-Q-V--------------------------------------------------------L--QSTAP--G-SWSLKMPSHVHIEALLKVFP----DARLIWAHRDPYKATGSLCNLWRLPQ--------------DQTEMGRLAMWQMRYHVDRPLRARERIG--DERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWLAH----------HPQD-R-FA--LNAYRLDTVEALQPIFAEYLDTFDIELE-----GR---------------- |
2 | 2z6vA | 0.13 | 0.10 | 3.54 | 1.12 | SPARKS-K | | --SDFDNITTADDVFKLAAQRTSWREGLALIVDEVNTS-----------PVFT-------------------PFGRQRVLDDATNALGRRLQVHAYIQDH---------------PEVLDAPVER--------PLIVLGMPRTGTTVISYLLDQDPARRSLL--HWQCVHPIPPASTETLRT--DPRCLALLDEQRKMPLPHWEDADGPTEDMFIHNQDFKGLSWDSFLPTD---RYARWLFDEA---DMSSTYEYQKRYLQVLQSTGSWSLKMSHSVHIEALLKVFP----DARLIWAHRDPYKATGSLCNLWR---LPQSLVMNTELLD--QTEMGRLAMWQMRYHVDRPLRARERIGD--ERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWLAHHPQDR--FALNAYRLDEYG-----LTV---EALQPIFAEYLDTFDIELEGR--------------------- |
3 | 2z6vA | 0.11 | 0.09 | 3.15 | 1.18 | MapAlign | | -SDFDNITTADDVFKLAAQRTGLSEIDSDSWREGLALIVDEV------------------------NTSPVFTPFGRQRVLDDATNALGRRLQVHAYIQD----------------------HPEVLDAPVERPLIVLGMPRTGTTVISYLLDQDPARRSLLHWQCVHPIPPASTETLRTDPRCLALLDEQRPHWEDADGPT-------------EDMFIHNQDFKGLSWDSFLPTDRYARWLFDEADMSSTYEYQKRYLQVLQSAPGSWSLKMPSSVHIEALLKVF----PDARLIWAHRDPYKATGSLCNLW----RLPQSLVMNTELLDQTEMGRLAMWQMRYHVDRPLRARER---IGDERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWL-----------AHHPQD-RFALNAYRLEYGLVEALQPIFAEYLDTFDI------ELEGR--------------- |
4 | 2z6vA | 0.12 | 0.10 | 3.52 | 0.85 | CEthreader | | -----------------------------------------------SDFDNITTADDVFKLAAQRTGLSEIDSDSWREGLALIVDEVNTSPVFTPFGRQRVLDDATNALGRRLQVHAYIQDHPEVLDAPVERPLIVLGMPRTGTTVISYLLDQDPARRSLLHWQCVPIPPASTETLRTDPRCLALLDEQRKILDAVTRAKMPLPHWEDADGPTEDMFIHNQDFKGLSWDSFLPTDRYARWLFDEADMSSTYEYQKRYLQVLQSTAPGSWSLKMPSHSVH---IEALLKVFPDARLIWAHRDPYKATGSLCNLW----RLPQSLVMNTELLDQTEMGRLAMWQMRYHVDRPLRARERIG---DERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWLAH----------HPQDRFALNAYRLDEYGLTVEALQPIFAEYLDTFDIELEGR--------------------- |
5 | 2z6vA | 0.12 | 0.10 | 3.38 | 0.88 | MUSTER | | -----------------------------------------------------SDFDNITTADDRTGLSEIDSDSWREGLALIVDEVNT--PVFTPFGRQRVLDDATNALGRRLQVHAYIQDHPEVLDAPVERPLIVLGMPRTGTTVISYLLDQDPARRSL--LHWQCVHPIPASTETLRTDPRCLALLDEQRKILD-RAKMPLPWEDADGPTEDMFIHNQDFKGLSWDSFLPTDRYARWLFDEAD--MSSTYEYQKRYLQVLQSTAGSWSLKM---PSHSVHIEALLKVFPDARLIWAHRDPYKATGSLCNLWRLPQSLVM--------NTELLDQTEMGRLAMWQMRYHVDRPLRARERIGERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWLAHHPQDR--FALNAYRLDEYG-----LT---VEALQPIFAEYLDTFDIELEGR--------------------- |
6 | 4gbmA | 0.14 | 0.08 | 2.65 | 2.44 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------SRLPGIIFILSSPRSGSTLLRVMLAGHSSLFSPPELHLLPFNTMKLNLSYLG-----EGLQKTFMEVKNLDATASQ-------------ALIKD-----L---------ESQ----NLS----IQQV-YGMLQE-NIAPRLLVDKSPTYAMEPTILERGEALFANSKYIYLVRHPYSVIESFVRMRMQKL-----VG-L-GE-E--NPYRV----AEQVWAKSNQNILNFLSLEPERQHQIRYEDLVKKPQQVLSQLCDFLNVPFEPELLQPYQGDRMTGGASDPNLKHNTIDESLADKWKTIQLPY---PLKSETQRIASQLSYELP----------------------- |
7 | 4goxA | 0.15 | 0.08 | 2.83 | 1.58 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------KQWQKPDHKNPNPIAFILSSPRSGSTLLRVMLAGHPGLYSPPELHLLPFETMGDRHQELGLSHLGEGLQRALMDLENLTPEASQAKV------------------NQWVKANTPIADIYAYLQRQA-------------------EQRLLIDKSPSYGSDRHILDHSEILFDQAKYIHLVRHPYAVIESFTR------------------LRMDNPYALAESIWRTSNRNILDLGRTVG---ADRYLQVIYEDLVRDPRKVLTNICDFLGVDFDEALLNPYSGDRLTDVGDPNFLQHKTIDPALADKWRSITLPAA---LQLDTIQLAETFAYDL------------------------ |
8 | 2z6vA | 0.13 | 0.10 | 3.41 | 1.10 | EigenThreader | | SDFDNITTADDVFKLAAQRTGWREGLALIVDEVNTS-------------------------PVFTPFGRQRVLDDATNALGRRLQVHAYIQDH-------------------PEVLDA-----------PVERPLIVLGMPRTGTTVISYLLDQDPARRS--LLHWQCVHPIPTETLRTDPRCLALLDEQRK-----ILDAVT---RAKMPLPEDMFIHNQDFKGLSWDSFLPTDRYARWLFDE-------ADMSSTYEYQKRYLAPGSWSLKMSHSVHIEALLKVF----PDARLIWAHRDPYKATGSLCNLW-----RLPQSLVMNTELLDQTEMGRLAMWQMRYHVDRPLRARER--IGDERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWLAHHPQDRFALNAYRLD----------EYGLTVEALQPIFAEYLDTFDIELEGR--------------------- |
9 | 2z6vA | 0.13 | 0.10 | 3.53 | 1.37 | CNFpred | | ---------TADDVFKLAAQRTG-DSWREGLALIVDEVNTSPVF------------------------TPFGRQRVLDDATNALGRRLQVHAYIQDHPEV--------------------LDAPV------ERPLIVLGMPRTGTTVISYLLDQDPARRSLLHWQCVHPIPPASTETLR-TDPRCLALLDEQRKILKMPLPHWEDADGPTEDMFIHNQDFKGLSWDSFLPT---DRYARWLFDEADMSSTY--EYQKRYLQVLQSTPGSWSLKMPSH--SVHIEALLKV-FPDARLIWAHRDPYKATGSLCNLW---RLPQSLVMNTE-----LLDQTEMGRLAMWQMRYHVDRPLRARERIGERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWLAHHPQDRFA------NAYRLDEYGL-----TVEALQPIFAEYLDTFDIELEGR--------------------- |
10 | 3ap1A | 0.13 | 0.07 | 2.38 | 0.67 | DEthreader | | ---------------------------------------------------------------------------------------------------------------------V---MVVEYRYG-AMPLIFVGGVPRSGTTLMRAMLDAHPEVRCGEET-RIIPRVLA-----MRQAWSKDVLDAAMQAFI-L-E--V----------------I------------------------------------A-KHG-EP--ARVLCNKDPFTLKS--SVYLSRL-FPNSKFLLMVRDGRASVHSMITRKVT----DL-S-----------SYRDCLTKWNKAIEVMYAQC-MEV--GKEKCLPVYYEQLVLHPRRSLKLILDFLGIAWSDAVLHHEDLI-------IERSDQVKVNLEALSKWTGHIPGDVVRDMAQIAP-MLAQLGYDPYA---NP-P--NY----G-NPDP- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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