Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KSKELQIKKQFQDTCKIQTRQYKALRNHLLETTPKSEHKAVLKRLKEEQTRKLAILAEQYDHSINEMLSTQALRLDEAQEAECQVLKMQLQQELELLNAYQSKIKMQAEAQHDRELRELEQRVSLRRALLEQKIEEEMLALQNERTERIRSLLERQAREIEAFDSESMRLGFSNMVLSNLSPEAFSHSYPGASGWSHNPTGGPGPHWGHPMGGPPQAWGHPMQGGPQPWGHPSGPMQGVPRGSSMGVRNSPQALRRTASGGRTEQGMSRSTSVTSQISNGSHMSYT |
1 | 3r6nA | 0.08 | 0.08 | 3.17 | 0.62 | CEthreader | | WGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKAIYQLEEEYENLLKASFERMDHLRQLQNIIQATSREIMWINDCEEEELLYQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAVDLS |
2 | 6z47G | 0.06 | 0.05 | 2.04 | 0.63 | EigenThreader | | ------------------------------------------------------QREIESLTQQFEEKAASYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQMLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAEMEDLVSSKDKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQNEEKRRQLLKQLHEHETELEDERKQRALAAAAKKKLEVDVKDLESQ |
3 | 6ireA | 0.13 | 0.08 | 2.67 | 0.99 | FFAS-3D | | AGFQAVGAAQIAELDTLRAAHAAERTSVQKTQNAINDQTKQWTDMIARHRKEEWDMLRQHVQDSQDAMKAL---MLTVQAAQIKQLEDRHARDIKDLNAKQAKMSADTAKEVDRRLREKRQNNVKRKKQIGVKQGRAMEKLKLAHSKQIEEFSTDVQKLMDMYKIEEEAYKTQG---------------------------------------------------------------------------------------------------------------- |
4 | 4uosA | 0.13 | 0.08 | 2.77 | 1.09 | SPARKS-K | | -GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVD-NEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG----------------------------------------------------------------------------------------------------------------- |
5 | 1jadA | 0.11 | 0.06 | 2.26 | 0.76 | CNFpred | | VELKERLEMELIHLGEEYHDGIRRRKEQHATE----QTAKITELAREKQIAELKALKESSESNIKDIKK----KLEAKRLDRIQVMMRST-SDKAAQERLKKEINNSHIQEVVQTIKLLTEKTARYQQKLEEKQAENLRAIQEKEGQLQQEAVAEYEEKLKTLTVEVQEM-------------------------------------------------------------------------------------------------------------------- |
6 | 2dfsA | 0.07 | 0.04 | 1.57 | 0.67 | DEthreader | | ------------------------------YQEFFSRYRVLMKRDKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQC----------L---YSTETEK------------------------------------------------------------------------------------------ |
7 | 4cgkA | 0.06 | 0.06 | 2.50 | 1.00 | MapAlign | | SKKLEGEITELSKNIVSRNQSLEKQARSATEAISRVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAI----NTVIANQQKLADDAQALTTKQAELKAAELSLAAEKATAEGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANTNLTAQVQAVSESAAAPVRPTYSTNASSYPIGECTWGVKTLAPWAGDYWGNGAQWATSAAAAGFRTGSTPQVGAIACWNDGGYGHVAVVTAVESTTRIQVSESNYAGNRTIGNHRGWFNPTTTSEGFVT |
8 | 4cgkA | 0.10 | 0.10 | 3.73 | 0.93 | MUSTER | | QQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQ-SKKLEGEITELSKNIVSRNQSLEKQARSAAVTSYINTIVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKAAEGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANTNLTAQVQAVSESAAAPVRAKVRPTYSTNASSYPIGETWGVKTLAPWAGDYWGNGAQWATSAAAAGFPQVGNDGGYGTTRRGWFNPTTTSEGFVTYI |
9 | 6gmhQ | 0.18 | 0.10 | 3.19 | 0.85 | HHsearch | | QVHIYVEQKQYISAVQMYENCLRKFLLKARHVAPSDLQRLATSVLKD-EKSNLKEVLKELELAHRYFSYLSKLALAATEARQCS----------DLLS--QAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNIL-M-------F---T--------------------------------------------------------------------------------------------------------- |
10 | 6tpiA | 0.10 | 0.10 | 3.83 | 0.59 | CEthreader | | AKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAQLKQTREEVAMQRAEEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIGASIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQPIALVGSSGGQGRPSLYFE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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