Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCCCCCCCCCSCSSCCCCCCCCCCCCCSSSSCCCCSSSHHHHHHHCCCCSSSCCCCCCCCCCCCCCHHHHHHHHHCCCCSSCCCCCSSSSCCCCCCCCSSCHHHHHHCCCSSSSCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKEEEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEP |
1 | 4nn2A | 0.28 | 0.22 | 6.59 | 1.17 | DEthreader | | --------TR-PKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQL-T--TTFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENGIYKLYCKNHSG------------------------ |
2 | 4nn2A | 0.28 | 0.22 | 6.61 | 3.97 | SPARKS-K | | ---------TRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAYIENMGIYKLYCKNHSG------------------------ |
3 | 4nn2A | 0.28 | 0.22 | 6.60 | 1.47 | MapAlign | | ----------RPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYISRGIYKLYCKNHSG------------------------ |
4 | 4nn2A | 0.27 | 0.21 | 6.43 | 1.67 | CEthreader | | ---------TRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSREFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSYKLYCKNHSG------------------------ |
5 | 4nn2A | 0.28 | 0.22 | 6.61 | 2.45 | MUSTER | | ---------TRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENGIYKLYCKNHSG------------------------ |
6 | 4nn2A | 0.28 | 0.22 | 6.61 | 4.04 | HHsearch | | ---------TRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIERGIYKLYCKNHSG------------------------ |
7 | 4nn2A | 0.27 | 0.21 | 6.42 | 1.28 | FFAS-3D | | ---------TRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSREFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMIYKLYCKNHS------------------------- |
8 | 4nn2A | 0.27 | 0.21 | 6.43 | 1.10 | EigenThreader | | ---------TRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSREFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAYIENMSRGKLYCKNHSG------------------------ |
9 | 4nn2A | 0.28 | 0.22 | 6.61 | 3.54 | CNFpred | | ---------TRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSREFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENGIYKLYCKNHSG------------------------ |
10 | 5ercA | 0.20 | 0.14 | 4.61 | 1.00 | DEthreader | | ------S-SRAVDCALCPN-K-GG----AFKQT-DDGRWAHVVCALWIPEVCF-A-N-TVFLEPIDS-IEHIPPARWKLTCYICKQRSGCIQCHKANCYTAFHVTCAQQAGLYMKMEVRKTAYCDIHTPP----------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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