Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCSCCCCCCHHHCCCCCCCCCSSCCCCCCSSCCCCCCCHHHCCCCCCCCCSCCCCCCCSSCCCCCCHHHCCCSCCCCCSCCCCCCCSSCCCCCHHHHHCCSCCCCCCCCCCCCCSSCCCCCHHHHCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCCCCCCCCCSCCCCCCHHHHCCCSCCCCCSSCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSCCCCCCHHHSCCCCCCCCCSCCCCCCCSSCCCCCCCCCCCCSCCCCCCCC MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEVPGEAPAPSADPARPHACPDCGRAFARRSTLAKHARTHTGERPFGCTECGRRFSQKSALTKHGRTHTGERPYECPECDKRFSAASNLRQHRRRHTGEKPYACAHCGRRFAQSSNYAQHLRVHTGEKPYACPDCGRAFGGSSCLARHRRTHTGERPYACADCGTRFAQSSALAKHRRVHTGEKPHRCAVCGRRFGHRSNLAEHARTHTGERPYPCAECGRRFRLSSHFIRHRRAHMRRRLYICAGCGRDFKLPPGATAATATERCPECEGS |
1 | 5v3jE | 0.38 | 0.25 | 7.48 | 1.00 | DEthreader | | ------------------------------------------------------------DEKCFECGKAFM----RPSHLLRHQRHTGEKPHKGKAF-R-----YDTQLSLHLTHARFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----------------------------------- |
2 | 5v3jE | 0.41 | 0.33 | 9.67 | 6.47 | SPARKS-K | | -------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHEKPYECKECGKT |
3 | 5v3jE | 0.37 | 0.32 | 9.38 | 1.79 | MapAlign | | CKECGKAFHTPSQLSHHQK------------------------------------LHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRG-----SELSRHQKIH--- |
4 | 5v3jE | 0.36 | 0.32 | 9.48 | 1.20 | CEthreader | | ----------------------PHKCKECGKAFHTPSQLSHHQ-----------KLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------- |
5 | 5v3jE | 0.36 | 0.31 | 9.31 | 4.35 | MUSTER | | --------------------------------PHKCKECGKAFHTPSQLSH-HQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------- |
6 | 5v3jE | 0.37 | 0.32 | 9.38 | 2.45 | HHsearch | | --------------------------------PHK-----CKECGKAFHTPHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------- |
7 | 5v3jE | 0.36 | 0.31 | 9.31 | 2.83 | FFAS-3D | | --------------------------------PHKCKECGKAFHTPSQ-LSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------- |
8 | 5v3jE | 0.41 | 0.31 | 9.11 | 1.47 | EigenThreader | | -----------------------------------------PHKCKECGKAFHTKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLQMSHTGEKPHKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----------------------------------- |
9 | 5v3mC | 0.41 | 0.33 | 9.66 | 7.65 | CNFpred | | -------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHE-PYECKECGKT |
10 | 3ugmA | 0.10 | 0.07 | 2.60 | 0.83 | DEthreader | | -AT------------------------------------------------VAIASHDGIGGQAQVVAIASHGGGKQALETVLLPDQVIVLLCHGLTDQVVAKQALTVQLLPLCQAHQLLVLAHGLPVVAGKALETVQRLLPVLLETVLLHLQVVIASNIGGAASNGGALAANGIGAAIASHDG----NGGGNNGGASNGGKQAVLLVVIANIGKQALETVQRLLPVLQRLLPVLCQLVVAGKQALETVQRLLPVLLETVLVLHLQVVIASNGGKQALETVL---------------A------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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