Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCSSSSCCCCC MLPAGCSRRLVAELQGALDACAQRQLQLEQSLRVCRRLLHAWEPTGTRALKPPPGPETNGEDPLPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLRDQQMAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWAQLSSTQTSDSTDAAAAKTQFLQNMQTASGGPQPRLSAVEVEAEAGRLRKACSLLRLRMREELSAAPMDWMQEYRCLLTLEGLQAMVGQCLHRLQELRAAVAEQPPRPCPVGRPPGASPSCGGRAEPAWSPQLLVYSSTQELQTLAALKLRVAVLDQQIHLEKVLMAELLPLVSAAQPQGPPWLALCRAVHSLLCEGGARVLTILRDEPAV |
1 | 6ijcA | 0.06 | 0.06 | 2.75 | 0.64 | CEthreader | | IAGEVLHPLNAVGDQEGCVLENGVVRPPKGFKEAFDQVREGGWTALDLPEQYGGQNMPYLLGTAVGEMFSGANQAFTMYQGLTHGAASAILVHGTDQQKDTYLPKMFSCDWTGTMNLTEPHCGTDLGLMRSKAVPQDDGSYAISGQKIHDMAENIIHLVLAKIPIKGVSLFIVPKFLVKEDGSLGERNGVDGAKGWLLGEEHKGMRAMFTMMNEARIGVGMQGLAQAEVIEGARAFLLWGAQMIDRAERGKDEAAHGMVSLLTPVIKGFLTDEGYDMTVQAQQVYGGHGYIEETGMSQFTRDARIAMIYEGANGVQALDLVGRKLAQDGGKHVMAFFDLVKGFIKEAGTDGAMAEFTEPLKSASKDLQSAGMFFMQNGMKNPNAALAGSYDFMHLFGHVCLGLMWGRMAEASLKALAEGRGDANFHETKLATA |
2 | 6xjpC | 0.05 | 0.05 | 2.23 | 0.68 | EigenThreader | | KIPQDNDLIKRQTVLFFQNTLQQIATSVDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYE----PLKKHIYEEICSQLRLVIIENMVRPEEVLVLARQIDGSEWSWHNINTLSWAIGSISGTMSQKRGKDNKAVVASDIMYVVGQYPRFLKAHMHETHEGVQDMACDTFIKIVQKCKYHFVIQQVHTFYKACGIIISEERSVAERNRLLSDLMVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGKVRGLRTIKKEILKLVETYISKADDVVKVLVEPLLNAVLEDYMNNVPDARDAEVLNCM-----TTVVEKVGHMIILQSVFECTLDMINEHRVEFYKLLKVINEKSFAAFLEFVDAICWAFKHNNRDVEVNGLQIALD |
3 | 5x6oG | 0.11 | 0.09 | 3.44 | 0.95 | FFAS-3D | | ------AQGEASMLRDNIE--REKEKNIQAVKVN----------------------------------ELVKHLQELAKLKQELQK-LEDEKKFLQRGKSKREVITNVKPPSTTLNTITPDSSSVAIEAKPQSPQSKNMVPLNPNRIIPDETSLHQIIGADLSTIEILNRLKLDYITEFKFKNFVIAKGAPIGKSIVLLRCKKTLTLDRFIDTLLEDIAVLIKEISVHPNESKL----AVPFLVALMYQIVQFRPSATHNLALKDCFLFICDLIRILLEGILRVLQSHPKQTYMEFSAVEVVNIITSIISWWRDCITRLYALLEKEIKSGDVYNENVDTTTSKLIYTDRLQSVPRVISKEYKMEKWLLKLKDEVLNIFENLHSSKFLSREQALMIERYVGQDSPNLDTLTIIYRLWKDHFKQLEEQIKQ---- |
4 | 6e5oY | 0.10 | 0.09 | 3.21 | 0.81 | SPARKS-K | | ----------------------------EKRINKIRKKLSA-DNATKPVSRSGPTDDLKKEKRRKKPEVMPQVISAANNLRMLLDDYTKMKEAILQVKDDHVGLMCKFAQPASKKIDQNKLKPEMDEKGYTNYFGRCNVAEHEKLILLAQLKPVKDSDEAVTYSLGKFGQRALDFYSIHVTKESTHPVKPIAGNRYALSDAGTIASFLSKYQDIIIEHQKVVKGNQKRLESLRENLE-------------YPSVTLPPQPHT-KEGVDAYNEVIARVRMWVNLNLWQKEVDW------WNTINEVKKLIDAKRDMGRVFNTILEGYNYLPNENDHKKRENPKKP--------------AKRQFGDLLLYLEKKKVFDEAWERIDKKIAGLTSHIEREEARNAEDLTDWLRAKASFVLER-------LKEMDEK |
5 | 1hciA | 0.09 | 0.05 | 1.93 | 0.91 | CNFpred | | -----RCQKICDQWDRLGTLTQKRREALERMEKLLETIDQL----------------------------HLEFAKRAAPFNNWMEGAMEDLQDMFIV------------------------------------------------------------------------------------------------------------HSIEEIQSLITAHEQFKATLPEADG-ERQSIMAIQNEVEKVIQSYNIRI-STVTMDELRTKWDKVKQLVPIRDQSLQEELA-------RQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQIT---------------------------ALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLT--------------- |
6 | 6vr4A | 0.08 | 0.05 | 2.01 | 0.67 | DEthreader | | DNNEKHSDEFESEIVKFFS-EKKLIIK--LV-GGDLVQAF----------------------------------------------------------------------------------------FRSFDSIHELEVLSDITTLHVQ-G--EVLD-VFSSYNKIKELADFKKSFEIYFIENNNESNFARPSNNTFKNPLALL--LELSI-FN-SL-QE--KD----------------KG-AEG-NDNG--------DKS-KR-PADALKYSSIVLVATTPNIVISL---NP-LT-LS-NAD-WK-LQQDLPSFIRIPDKY-K-GVGITN------F-NAPNFNTYTSQEKRENLYVSQTNSNGLLTNVGKLFYKEVYKYA--I-TSFGITLYSADLENPELANKFISSFLNGFE----KEYIPYQW--- |
7 | 1vt4I3 | 0.07 | 0.07 | 2.99 | 1.16 | MapAlign | | -YLDQYFYSHIGHHLKNHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
8 | 3tnfB | 0.10 | 0.09 | 3.14 | 0.62 | MUSTER | | IKRAQENIKKGEELEKKLDKLERQGKDLEDKYKTYEENLEGFE----------------KLLTDSEELSLSEINEKMEAFSKDSEKLTQLME---KHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHEGQFYLLQKGQWDAIKNNPAALEKAQKDYSQSKHDL-----ATIKMEALIHKLSLEMEKQLETINNLIMSTDPKENEEATKLLHKHNGL------NLKLANLQDMLAVHRKEKSFF------NEKGEEVTSLNDAHYVIGKDQQLFNLGGKFYPIHKEQKILEKQGEDWESIKDSPEKQKKAEHDFHKLQYETPMTVKKHNKGLETTIHKERVEETKQQLEDNGKEKIEIANNISK------------------------------------ |
9 | 1vt4I3 | 0.13 | 0.04 | 1.45 | 0.68 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EYALHRSIVDYNIPKTFDSDDPPYLD----------QYFYSHIGHHLKN------IEHPERMTLFR------MVFLDFRFLEQKIRHDSTAWNA----------------------------SGSILNTLQQ---LKFYKPYICDNPKYERLVN-AILDFLPKIEENICSYTDLLRIA--LMAEDEAIFEEAHKQVQRG |
10 | 6kptA | 0.08 | 0.08 | 3.12 | 0.64 | CEthreader | | NLFEVFGVDKVLGADKFSDLDADTAREMLTEIARLAEGPIAESFVEGDRNPPVFDPETHTVTLPEGFKKSMRALFDGGWDKVGLAEHLGGIPMPRALQWALIEHILGANPAAYMYAMGPGMSEIFYNNGTDEQKKWATIAAERGWGATMVLTGRTKAVQQPDGTWHIEGVKRFITSADSNIMHLVLARPEGALSLFFVPKFHFDHETGEIGERNGVFVTNVEHKMGLKVSAAVGWLVGEVHNGIAQMFDVIEQARMMVGTKAIATLSTGYLNALEYAKERVQGADMTQMTDKTAPRVTITHHPDVRRSLMTQKAYAEGLRAIYLYTATFQDAEVAQAVHGVDGDLAARVNDLLLPIVKGFGSETAYAKLTESLQTLGGSGFLQDYPIEQYIRDSKIDSLYEGTTAIQAQDFFFRKIIRDKGQALAYVAGEIEQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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