>Q7L1T6 (146 residues) MLNVPSQSFPAPRSQQRVASGGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIEVTEE ELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESM LKECLVGRMAIKPAVLKDYREEEKKV |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MLNVPSQSFPAPRSQQRVASGGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRMAIKPAVLKDYREEEKKV |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCSSCHHHHHHCCCCCCSSSSSCCSSSSCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCSSSCCCCCCCCHHHHHHCCC |
Confidence | 98899988889986667788886423479998811257750478774557988873089999962998974999989997042444328993999999858405699998698299999997076378768853211223544259 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MLNVPSQSFPAPRSQQRVASGGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRMAIKPAVLKDYREEEKKV |
Prediction | 72524664343554456456644442315424342313413565553663655345023620561457730000044301300521653442341026201310042047233473045006713026045666436636556766 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCSSCHHHHHHCCCCCCSSSSSCCSSSSCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCSSSCCCCCCCCHHHHHHCCC MLNVPSQSFPAPRSQQRVASGGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRMAIKPAVLKDYREEEKKV | |||||||||||||||||||
1 | 3e0dA | 0.05 | 0.04 | 1.94 | 0.83 | DEthreader | ---------QFLGAAKLQDLKEFKAPIIADFYVDLPIGKMVYRMGFY-SMPD-IDTFRDRVIQYVRGEDKVAQVHAAGVVIAAELTDLV-P---LM-RDEGRPVT--Q---Y----DMGAVEGLLKMDFLGLRLTFLSVERHDSVL | |||||||||||||
2 | 2ibjA | 0.33 | 0.19 | 5.77 | 2.26 | SPARKS-K | --------------------------------------------------SEDVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGELVAEERSN---------- | |||||||||||||
3 | 1lj0A | 0.29 | 0.16 | 5.01 | 1.11 | MapAlign | -------------------------------------------------SDPAVTYYRLEEVAKRNTSEETWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDAREMSKQYYIGDVHPND------------- | |||||||||||||
4 | 1lj0A | 0.29 | 0.18 | 5.42 | 1.05 | CEthreader | ------------------------------------------------GSDPAVTYYRLEEVAKRNTSEETWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDAREMSKQYYIGDVHPNDLKPK--------- | |||||||||||||
5 | 3lf5A | 1.00 | 0.60 | 16.68 | 1.99 | MUSTER | --------------------------------------------------KGRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRMAIKPAVLK--------- | |||||||||||||
6 | 1kbiA | 0.26 | 0.18 | 5.49 | 2.92 | HHsearch | ----------------------------------------------EPKLDMNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNVIDKYIAPKKLGPLQGSMPPELVCPPYAPET | |||||||||||||
7 | 1lj0A | 0.29 | 0.18 | 5.42 | 1.63 | FFAS-3D | ------------------------------------------------GSDPAVTYYRLEEVAKRNTSEETWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDAREMSKQYYIGDVHPNDLKPK--------- | |||||||||||||
8 | 2i96A | 0.26 | 0.18 | 5.49 | 0.98 | EigenThreader | ---------------------------------------------MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNK--PPETL | |||||||||||||
9 | 3lf5A | 1.00 | 0.60 | 16.68 | 2.06 | CNFpred | --------------------------------------------------KGRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRMAIKPAVLK--------- | |||||||||||||
10 | 1soxA | 0.23 | 0.14 | 4.51 | 0.83 | DEthreader | ----------------------------------------------------SYPEYTREEVGRHRSPERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVEPHVLELLQQYKVGELSPD-EAP-GPAVEPSSY | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |