Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCSSSSSSSSSSCCCSSSSSCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCSSSSSSSSSSCCCCCCCCCCCCCCSSSSSSSSCCSSHHHHHHHCCCSSSSSSCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC DYVAPTANLDQKDKQFVAKVMQVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP |
1 | 3bdlA3 | 0.24 | 0.20 | 6.31 | 1.17 | DEthreader | | DTQAQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKTCLITFLLAGIECPRGA-RNLPGL-V--QE-GEP-FSEEATLFTKELVLQREVEVEVESM-DK--------A--GNFIGWLHIDGANLSVLLVEHALSKVHF-TAE--R-SSYYKSLLSAEEAAKQKKEKVWA----- |
2 | 3bdlA1 | 0.99 | 0.93 | 26.06 | 3.13 | SPARKS-K | | -----------MDKQFVAKVMQVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP |
3 | 3bdlA | 1.00 | 0.90 | 25.25 | 1.45 | MapAlign | | -------------KQFVAKVMQVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK---- |
4 | 3bdlA | 0.99 | 0.93 | 26.06 | 1.26 | CEthreader | | -----------MDKQFVAKVMQVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP |
5 | 3bdlA1 | 0.99 | 0.93 | 26.06 | 2.46 | MUSTER | | -----------MDKQFVAKVMQVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP |
6 | 3bdlA1 | 0.99 | 0.93 | 26.06 | 3.39 | HHsearch | | -----------MDKQFVAKVMQVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP |
7 | 3bdlA1 | 0.99 | 0.93 | 26.06 | 2.61 | FFAS-3D | | -----------MDKQFVAKVMQVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP |
8 | 3bdlA1 | 0.91 | 0.84 | 23.72 | 1.50 | EigenThreader | | -----------MDKQFVAKVMQVLNADAIVVKLNSGDYKTIHLSSRPPRLEGENTQDKNK-KLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP |
9 | 3bdlA | 1.00 | 0.93 | 26.06 | 2.36 | CNFpred | | ------------DKQFVAKVMQVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP |
10 | 3bdlA | 0.23 | 0.20 | 6.16 | 1.17 | DEthreader | | DTQAQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKTCLITFLLAGIECPRGARN-LPGL-V--QE-GEP-FSEEATLFTKELVLQREVEVEVESM--D-------KA--GNFIGWLHIDGANLSVLLVEHALSKVHF-TAE--R-SSYYKSLLSAEEAAKQKKEKVWA----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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