>Q719I0 (187 residues) MAKWGQGNPHWIVEEREDGTNVNNWRWTERDATSLSKGKFQELLVGIVVENDAGRGEINE LKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIVKESGVKHKGLIEIPNLSEENEVDDTEV SLSKKKGDGVILKDLMKTAGTAKVREALGDYLKALKTEFTTGMILPTKAMATQELTVKRK LSGNTLQ |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MAKWGQGNPHWIVEEREDGTNVNNWRWTERDATSLSKGKFQELLVGIVVENDAGRGEINELKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIVKESGVKHKGLIEIPNLSEENEVDDTEVSLSKKKGDGVILKDLMKTAGTAKVREALGDYLKALKTEFTTGMILPTKAMATQELTVKRKLSGNTLQ |
Prediction | CCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCSSSCCCSSSSSSSSSSSSSSSSSSSSCCCSSSSSSSSSSSSSSSSSCCCCCSSSSSSSSCCCCCCCCCCCSSSSSSSCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCSCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 9855689964254457888688677765457878999999998346288559818999986687427999963691788899999999999956998378899981323578988752899993797238999999998289999999999999999972386357889998862344205787789 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MAKWGQGNPHWIVEEREDGTNVNNWRWTERDATSLSKGKFQELLVGIVVENDAGRGEINELKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIVKESGVKHKGLIEIPNLSEENEVDDTEVSLSKKKGDGVILKDLMKTAGTAKVREALGDYLKALKTEFTTGMILPTKAMATQELTVKRKLSGNTLQ |
Prediction | 7243464343112543741523111104243126103620462056141657614040440551524041333443301102030203020335767550503040120144346441403033667535402520365026302620560163027414652412576465763445554666548 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCSSSCCCSSSSSSSSSSSSSSSSSSSSCCCSSSSSSSSSSSSSSSSSCCCCCSSSSSSSSCCCCCCCCCCCSSSSSSSCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCSCCCCCCCCCCCCCCCCCCCCCCC MAKWGQGNPHWIVEEREDGTNVNNWRWTERDATSLSKGKFQELLVGIVVENDAGRGEINELKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIVKESGVKHKGLIEIPNLSEENEVDDTEVSLSKKKGDGVILKDLMKTAGTAKVREALGDYLKALKTEFTTGMILPTKAMATQELTVKRKLSGNTLQ | |||||||||||||||||||
1 | 1usvF | 0.22 | 0.16 | 5.07 | 1.17 | DEthreader | -------------------W---H--WVDKNCIGWAKEYFKQKLVGVEAGSDKKYAKIKSVSSIEGDCEVNQRKGKVISLFDLKITVLIEGHVDDGSAPFEGSINVPEVAFDSEASSYQFDISIFKETLSEAKPLIRSELLPKLRQIFQQFGKDLLATHGN--D----------------------- | |||||||||||||
2 | 1usvF | 0.22 | 0.17 | 5.21 | 2.86 | SPARKS-K | ------------------------WHWVDKNCIGWAKEYFKQKLVGVEAGSDKKYAKIKSVSSIEGDCEVNQRKGKVISLFDLKITVLIEGHVDSKDLPFEGSINVPEVAFDSEASSYQFDISIFKEELSEAKPLIRSELLPKLRQIFQQFGKDLLATHGND------------------------- | |||||||||||||
3 | 1usvF | 0.23 | 0.17 | 5.35 | 1.47 | MapAlign | ------------------------WHWVDKNCIGWAKEYFKQKLVGVEAGKDKKYAKIKSVSSIEGDCEVNQRKGKVISLFDLKITVLIEGHVDGSALPFEGSINVPEVAFDSEASSYQFDISIFKEELSEAKPLIRSELLPKLRQIFQQFGKDLLATHGN-------------------------- | |||||||||||||
4 | 1usvF | 0.22 | 0.17 | 5.21 | 1.67 | CEthreader | ------------------------WHWVDKNCIGWAKEYFKQKLVGVEAGSVKKYAKIKSVSSIEGDCEVNQRKGKVISLFDLKITVLIEGHVDGSALPFEGSINVPEVAFDSEASSYQFDISIFKEELSEAKPLIRSELLPKLRQIFQQFGKDLLATHGND------------------------- | |||||||||||||
5 | 1usvF | 0.22 | 0.16 | 5.07 | 2.09 | MUSTER | ------------------------WHWVDKNCIGWAKEYFKQKLVGVEAGSDKKYAKIKSVSSIEGDCEVNQRKGKVISLFDLKITVLIEGHVDSKDLPFEGSINVPEVAFDSEASSYQFDISIFTSELSEAKPLIRSELLPKLRQIFQQFGKDLLATHGND------------------------- | |||||||||||||
6 | 3n72A | 0.25 | 0.19 | 5.81 | 4.78 | HHsearch | -----------------SSGRENLYFQGERNYNKWAESYIKYNLSNLKIE----TIYFDNL-QVSGNACVSIRKGKQINSFEYIIKFEWLYS------YFGGSVEIPDFSTFSEENDYAINIEDESENLRFIYDILKKEGKEKIKECLKNFQEDLLKHDKNESNKELKI------------------ | |||||||||||||
7 | 1usvF | 0.22 | 0.16 | 5.07 | 1.93 | FFAS-3D | ------------------------WHWVDKNCIGWAKEYFKQKLVGVEAGSDKKYAKIKSVSSIEGDCEVNQRKGKVISLFDLKITVLIEGHVDSKDGSFEGSINVPEVAFDSEASSYQFDISIETSELSEAKPLIRSELLPKLRQIFQQFGKDLLATHGND------------------------- | |||||||||||||
8 | 7dmeA | 0.37 | 0.31 | 9.21 | 1.17 | EigenThreader | ---------------------------TERDASNWSTDKLKTLFLAVQVQNEEGKCEVTEVSKLDGEASINNRKGKLIFFYEWSVKLNWTGTSKSGV-QYKGHVEIPNLSDENSVDEVEISVLAKDEPDTNLVALMKEEGVKLLREA--MGIYISTLKTEFTQGMILPTMNGESVDPVGQPALKTEE | |||||||||||||
9 | 1usvB | 0.23 | 0.17 | 5.20 | 2.09 | CNFpred | --------------------------WVDKNCIGWAKEYFKQKLVGVEAGSDKKYAKIKSVSSIEGDCEVNQRKGKVISLFDLKITVLIEGHVDSSALPFEGSINVPEVAFDSEASSYQFDISIFKEELSEAKPLIRSELLPKLRQIFQQFGKDLLATHGN-------------------------- | |||||||||||||
10 | 1bp1A | 0.08 | 0.07 | 2.72 | 1.00 | DEthreader | --------------NPGVVVR--I-SQKGLASQQGTAALQKELKRIKIPDYSSFYSMDIREFQLPSSQISMVPN-VGLKFSISNANIKISGKWKAQSGNFDLSIEGMSISADSCS-SHINSVHVHISGIQLFHKKIESALRNKMNSQVCEKVTNSVSLQPYFQPVQMGLPTPVQVYK---------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |