Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MEQLSDEEIDHGAEEDSDKEDQDLDKMFGAWLGELDKLTQSLDSDKPMEPVKRSPLRQETNMANFSYRFSIYNLNEALNQGETVDLDALMADLCSIEQELSSIGSGNSKRQITETKATQKLPVSRHTLKHGTLKGLPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPN |
1 | 1vt4I3 | 0.05 | 0.05 | 2.36 | 0.43 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 7ckqF | 0.07 | 0.07 | 2.88 | 0.58 | EigenThreader | | PVRMYLKEIGRVNLLSAKEEIAYAQKIEEGKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKF------DKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPEEIAEDMDLTPEKVREILKIAQENVLRLRFGLDDGRTRTKALRKLRHPSRSKRLKDFLE |
3 | 5e84A2 | 0.17 | 0.08 | 2.67 | 0.52 | FFAS-3D | | ---LTPEEIERMVNDEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKA-------VEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISK-------------------------------------------------------------------------------------------- |
4 | 6m7wA | 0.09 | 0.07 | 2.69 | 0.74 | SPARKS-K | | INWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKN-----------------------LTELDNLGHFLAALGLQRIAWVCERIQNLGR----KMEHFFPNKTELVNTLSDKSIINGINIDEDD--EEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIELSKYYNTNL-------------- |
5 | 4g78A | 0.12 | 0.07 | 2.51 | 0.54 | CNFpred | | QQGYLDDQFSQLQKLQDDTSPDFVIEVMTMFFDDSEKLLNNMSRALEQVPVNFKQIAHAHQQKGSSASVGAARVKNVCGTFRNFNLEGCVRCLQQLQQEYSLLKN----------------------------------------------------NLKYLFKLQQEIKT--------------------------- |
6 | 5iwkA | 0.04 | 0.03 | 1.54 | 0.83 | DEthreader | | RKHIQSTLYPELVSLKKRYGRPYFCVLGAIYVLYIICFTMCCVYRPLRLNSDGEVVPMSFALVLGWCNVMYF-ARG----MFGDLRFCWQMAVVILGFASAFYIIQTEPYDPMALFSTFELFLTI-ID-----------------------ATLLMLN---------------------------ERDWRAQATVMLK |
7 | 5b2oA | 0.08 | 0.08 | 3.01 | 0.82 | MapAlign | | -----RLPAIPTRIVDGAVKKMATILAKNIVDDNWQNIKQVLSAKHQLHIPIITEFDYFGIPTIGNGRGIAEIRQLYEKVDSDIQHLIDAMLAFCIAADKKAIEGFNTHRQMTRDGIYAENYLPILIHKELNEVRKGYTWKNSEEIKIFKGKKYDIQQLNNLVYCLKFISTLEELRNILTTNNIAATAEYYYINL--- |
8 | 4k0mC | 0.12 | 0.11 | 3.76 | 0.56 | MUSTER | | -KVYT---IDEAARTAKFDETVEVHAKLG------------IDPRRSDQNV-RGTVSLPHGLGKQVRVLAIAK-GEKIKEAEEAGADYVGGE--EIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
9 | 2pffB | 0.23 | 0.22 | 6.98 | 0.64 | HHsearch | | LGYVSSGQFDQTEFENCYLEGNDIHALAAKLLQENDYITARIMAKRPFDKKNSALFRAGEGNAQLVAIFTDDYFEELLYQTYHV----LVGDLIKFAETLSELIRTTLDAEFTTPKDYLLSPISCPLLAHAKLLGFTPGELRSYLKGATGHSQGLVESFKAITVLFFIGVRCYAYPNTSVPSPMLSISNLTQEQVGAK |
10 | 7k4oA2 | 0.06 | 0.06 | 2.62 | 0.43 | CEthreader | | ----RWSFQQTQHLYSNVVEKTLDYYPPPCELDKIVNETIAACDAMDGKVDWVVARTDLCLLDFDISTIEGKPYSCAASRGTPAQNGTVSAKGIEVAKTIINGLHDSQGRRVYFSYQPTAAFDDAETQYNSTTGQWGLDIDQLGGEDKNGTTLDSLDGVTYDTLKDWMISGLQEYYSTLQRPLWTNNGTTMECVYNQR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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