>Q709F0 (359 residues) MKPGATGESDLAEVLPQHKFDSKSLEAYLNQHLSGFGAEREATLTIAQYRAGKSNPTFYL QKGFQTYVLRKKPPGSLLPKAHQIDREFKVQKALFSIGFPVPKPILYCSDTSVIGTEFYV MEHVQGRIFRDLTIPGLSPAERSAIYVATVETLAQLHSLNIQSLQLEGYGIGAGYCKRQV STWTKQYQAAAHQDIPAMQQLSEWLMKNLPDNDNEENLIHGDFRLDNIVFHPKECRVIAV LDWELSTIGHPLSDLAHFSLFYFWPRTVPMINQGSYSENSGIPSMEELISIYCRCRGINS ILPNWNFFLALSYFKMAGIAQGVYSRYLLGNNSSEDSFLFANIVQPLAETGLQLSKRTF |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MKPGATGESDLAEVLPQHKFDSKSLEAYLNQHLSGFGAEREATLTIAQYRAGKSNPTFYLQKGFQTYVLRKKPPGSLLPKAHQIDREFKVQKALFSIGFPVPKPILYCSDTSVIGTEFYVMEHVQGRIFRDLTIPGLSPAERSAIYVATVETLAQLHSLNIQSLQLEGYGIGAGYCKRQVSTWTKQYQAAAHQDIPAMQQLSEWLMKNLPDNDNEENLIHGDFRLDNIVFHPKECRVIAVLDWELSTIGHPLSDLAHFSLFYFWPRTVPMINQGSYSENSGIPSMEELISIYCRCRGINSILPNWNFFLALSYFKMAGIAQGVYSRYLLGNNSSEDSFLFANIVQPLAETGLQLSKRTF |
Prediction | CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCSSSSSCCCCCCSCSSSSSSCCSSSSSSSCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCCCCCSSSSSSCCCSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCSSSSCCCCCCSSSSSCCCCSSSSSSSCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC |
Confidence | 99988899998776776689999999999997123478875424799838985012799996993599995999877775357999999999973169998817998489885885158986228833687666679999999999999999999817992325853357887539999999999999713699779999999999609988899679818899872999189996999994799860886999999998742677620121133323589999999999999997999964451699999999999999999999981799992499999999999999999999759 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MKPGATGESDLAEVLPQHKFDSKSLEAYLNQHLSGFGAEREATLTIAQYRAGKSNPTFYLQKGFQTYVLRKKPPGSLLPKAHQIDREFKVQKALFSIGFPVPKPILYCSDTSVIGTEFYVMEHVQGRIFRDLTIPGLSPAERSAIYVATVETLAQLHSLNIQSLQLEGYGIGAGYCKRQVSTWTKQYQAAAHQDIPAMQQLSEWLMKNLPDNDNEENLIHGDFRLDNIVFHPKECRVIAVLDWELSTIGHPLSDLAHFSLFYFWPRTVPMINQGSYSENSGIPSMEELISIYCRCRGINSILPNWNFFLALSYFKMAGIAQGVYSRYLLGNNSSEDSFLFANIVQPLAETGLQLSKRTF |
Prediction | 35464545653453266370227202500352056142544231303303211101001022562300000223463254142032002004103724010010000033430010000000202111043330541225202310320030014014031640304302321210120033014103414443041033005103631464642000000002000000137612000000032001010000000000001124323212211124221101132003101311415231620200000000000000000021122352435404400510220051005105517 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCSSSSSCCCCCCSCSSSSSSCCSSSSSSSCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCCCCCSSSSSSCCCSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCSSSSCCCCCCSSSSSCCCCSSSSSSSCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC MKPGATGESDLAEVLPQHKFDSKSLEAYLNQHLSGFGAEREATLTIAQYRAGKSNPTFYLQKGFQTYVLRKKPPGSLLPKAHQIDREFKVQKALFSIGFPVPKPILYCSDTSVIGTEFYVMEHVQGRIFRDLTIPGLSPAERSAIYVATVETLAQLHSLNIQSLQLEGYGIGAGYCKRQVSTWTKQYQAAAHQDIPAMQQLSEWLMKNLPDNDNEENLIHGDFRLDNIVFHPKECRVIAVLDWELSTIGHPLSDLAHFSLFYFWPRTVPMINQGSYSENSGIPSMEELISIYCRCRGINSILPNWNFFLALSYFKMAGIAQGVYSRYLLGNNSSEDSFLFANIVQPLAETGLQLSKRTF | |||||||||||||||||||
1 | 3atsA | 0.19 | 0.17 | 5.57 | 1.33 | DEthreader | -------------------TLPAVISRWLSS-VLP--GGAAPEVTVESGVDMSSETIILTARIQQKLVARVAPAAEPFPT-YRLDHQFEVIRLVGETDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDYNFADAPAERQRQLQDATVAALATLHSIPAQNTFSFLTTTLHRHFNWVRSWYDFAVEGIG--RSPLLERTFEWLQSHWPDAAREPVLLWGDARVGNVLYR-D-FQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLA-T-LPGLPEVMREDDVRATYQALTGVELG-D-LHWFYVYSGVMWACVFMRTGARR-VHFGEIEKPDDVESLF-YHAGLMKHLLGEEH | |||||||||||||
2 | 3atsA | 0.20 | 0.18 | 5.71 | 1.55 | SPARKS-K | -------------------TLPAVISRWLSSVLPGGA-----APEVTVESTGMSSETIILTARQQKLVARVAPAVPVFPTYR-LDHQFEVIRLVGELDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDT--TLHRHFNWVRSWYDFAVEGRSPLLERTFEWLQSHWPDDAREPVLLWGDARVGNVLYRD--FQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMRE--DDVRATYQALTGVELG--DLHWFYVYSGVMWACVFMRTGARRVHFGEIEK-PDDVESLF--YHAGLMKHLLGEE | |||||||||||||
3 | 3atsA | 0.19 | 0.17 | 5.41 | 0.89 | MapAlign | ------------------TL-PAVISRWLSSVL-----PGGAAPEVTVESGVDETIILTARWQQQKLVARVAPAAEDPVFPTYLDHQFEVIRLVGLTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPYTNWFADAPAERQRQLQDATVAALATLHSINAQNT-FSFLTTLHRHFNWVRSWYDFAVEGIG--RSPLLERTFEWLQSHWPAAAREPVLLWGDARVGNVLYR--DFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGL--PEVMREDDVRATYQALTGVE--LGDLHWFYVYSGVMWACVFMRTGARRVHFGE----IEKPVESLFYHAGLMKHLLGEEH | |||||||||||||
4 | 3atsA | 0.19 | 0.18 | 5.66 | 0.69 | CEthreader | -------------------TLPAVISRWLSSVLPGGA-APEVTVESGVDSTGMSSETIILTARQQKLVARVAPAAEPVFPTYRLDHQFEVIRLVGETDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPAAAREPVLLWGDARVGNVLYR--DFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGL--ATLPGLPEVMREDDVRATYQALTGV--ELGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH-- | |||||||||||||
5 | 3atsA | 0.20 | 0.18 | 5.72 | 1.35 | MUSTER | ------------------TL-PAVISRWLSSVLPGGAAPE--VTVESGVDTGMSSETIILTARQQKLVARVAPAAVPVFPTYRLDHQFEVIRLVGELDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFL--TDTTLHRHFNWVRSWYDFAVEGRSPLLERTFEWLQSHWPDDAREPVLLWGDARVGNVLYR--DFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLAT--LPGLPEVMREDDVRATYQALTGVELG--DLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLF---YHAGLMKHLLGEE | |||||||||||||
6 | 3atsA | 0.20 | 0.18 | 5.88 | 1.52 | HHsearch | -------------------TLPAVISRWLSSVLPGGAA--PEVTVESGVSTGMSSETIILTARQQKLVARVAPAAVPVFPTYRLDHQFEVIRLVGETDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMFGDAPAERQRQLQDATVAALATLHSIPNAQNTFSFLT--DTTLHRHFNWVRSWYDFAVEIGSPLLERTFEWLQSHWPDDAREPVLLWGDARVGNVLYR--DFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGL-ATL-PGLPEVMREDDVRATYQALTGVEL--GDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYH--AGLMKHLLGEEH | |||||||||||||
7 | 3atsA | 0.21 | 0.19 | 6.01 | 2.87 | FFAS-3D | ---------------------PAVISRWLSSVLPG-GAAPEVTVESGVDSTGMSSETIILTSIQQKLVARVAPAAEPVFPTYRLDHQFEVIRLVGETDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAREPVLLWGDARVGNVLYR--DFQPVAVLDWEMVALGPRELDVAWMIFAHR--VFQELAGLATLPGLPEVMREDDVRATYQALTGVELG--DLHWFYVYSGVMWACVFMRTGARRVHGEIKPDDVESLAGLMKHLL----------- | |||||||||||||
8 | 3atsA | 0.17 | 0.15 | 5.03 | 1.02 | EigenThreader | -------------------TLPAVISRWLSSVL----PGGAAPEVTVESSTGMSSIILTARWQGRSLVARVAVPVFPTYRLDHQFEVIRLVGELT--DVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVWFADAPAERQRQLQDATVAALATLHSINAQNTFSFLTDTTLHRHFNWVRSWYDFAVEGIGRS-----PLLERTFEWLQSHWPEPVLLWGDARVGNVLYRD--FQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLA--TLPGLPEVMREDDVRATYQALTGVELDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDD-----VESLFYHAGLMKHLLGEEH | |||||||||||||
9 | 3dxpA | 0.40 | 0.37 | 10.84 | 2.04 | CNFpred | -------------------FDTEALEAWMRQHVEGFAG----PLSVEQFKG-QSNPTFKLVTPGQTYVMRAKPG--------AIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPI-TGDWNFYLAFSMFRIAGILQGIMKRVVDGTASSAQALDAGKRARPMAEMGWEYAKKAK | |||||||||||||
10 | 3dxpA | 0.37 | 0.32 | 9.43 | 1.17 | DEthreader | --------------------R-FD-TEALEAWRQVEGFAG-PLSVEQFKG-Q-SNPTFKLVTPGQTYV-RAKPG-----A---IEREYRV-DALAGTDVPVAK-YALCEDESVIGRAFYI-EFVSGRVL-WDQSLPGSPAERTAIYDE-NRVIAA-HTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA-DSLDWLPQHIPQEDADLTSIVHGDYRLDNL-FHPTEPRVLAVLDWELSTLGHP-GDFGYHCS-WHIAPGQFRG--IAGLDHLGIPDEASYRKLYEQRTGRPIT-GDWNFYLAFS-FRIAGILQGI-KRVVDGTASSAQALDAGKRARP-AE-GWEYAKKAK | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |