Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCSSSSCCCCCSSSSSCCCCCCCCCSSSSSSSSSCSCCCCCCCSSSSSCCCCSSSSCCHHHCCCCSSSSCCCCCCCCCCCCCCCCCCCHHHHHHHHHHSSSSCCCCSSSSCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSSSSCCCCCSSSCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC GKLSYWVDRRRKAILVQVPRASGSPDYYLRLCLKRFTCEDAGAPVRVTANSVSQAVFLPYSQELPCLCLEGWSATPDAVRIQICPFENDTEALEVLWDTVYYHPESQTLSWEPACPVSGHVSLCWRPGPGAGCRKLQQSSQLVHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHSSLPANAHSRPARSLQPQVTWQPPLLLPS |
1 | 6hg4B | 0.24 | 0.24 | 7.37 | 2.24 | SPARKS-K | | ALPWLNVSADGDNVHLVLQV-SEEQHFGLSLYWNQVQGPPKRWHKQLTG---PQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSTVDKVLEFPLLKGHPNLCVQVQSSEKLQLQCLWADSLGPLKQRSLC-ALEPSGCTSLPSKASTRAARLGEYQCLWDDDLGALW |
2 | 6hg4B | 0.15 | 0.13 | 4.50 | 1.13 | MapAlign | | PTLQTELVDCDLCLRVAVHLAVLQAQVVLSFQAY-----PTARCVLLEVQVGSVVYCFEAALGS-EVRIWSYTQPRYEKELQHTQPCLDPRAHQNLWQARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLPLSWEQVTVDKVLEFPLGHPNLCVQVQSSEKLQQECLWALGPLKDDVLLLETRGPQDQRSLCALEPSG-------------------- |
3 | 6hg4B | 0.25 | 0.24 | 7.47 | 7.03 | HHsearch | | LPW-LNVSADGDN-VHLVLQVSEEQHFGLSLYWNQVQGPKPRWHKQLTG---PQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLT-LQSWLAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEDKVLEFPLLKGHPNLCVQVQSSEKLQLECLWADSLGPLDQRSLCA-LEPSGCTSLPSKASTRAA-RLGEYLLWDDDLGALW |
4 | 6hg4B | 0.25 | 0.24 | 7.34 | 1.78 | FFAS-3D | | -WLNVSADGDNVHLVLQVSE---EQHFGLSLYWN--QVQGPPKPRWHKQLTGPQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEDKVLEFPLLKGHPNLCVQVQSSEKLQLQCLWADSLGPLKDDVLLLALEPSGCTSLPSKASTRAAQDLQSGQCWDDDL---- |
5 | 2fhfA | 0.07 | 0.05 | 2.27 | 0.83 | DEthreader | | FAADAHWVD-KTTLLWPGGEN---KPIVRLYYSHSSKV--KYVKLTPT----YPAFKLDVVDLLQETVAIAAESDG-ILSSATQVQ--T-AGVLDTYAALYGAQTGVTFRVWAPT-AQQVELVIYSAD----KKVIA-SHPMTRDAWSWQGGDLKGAFYRYAMTVEYEVTDAHSLSTNSARTSVLIVY----HRMFALI----SLAVWTTDR------------ |
6 | 6hg4B2 | 0.29 | 0.12 | 3.67 | 1.21 | SPARKS-K | | PWLNVSADGDNVHLVLQV---SEEQHFGLSLYWNQVGPPKPRWHKQLTG---PQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAA---------------------------------------------------------------------------------------------------------------------------- |
7 | 4u48A4 | 0.09 | 0.07 | 2.70 | 1.08 | MapAlign | | LNLTAQPLAPADEVKFSVVGYANGNTLQGQLFLRPLNLSRSLDEVQLTLKGGRGEVSAASQWSPLQVILQASLLEGRPVTRRVEQA--I-WPADTLP-GIRPQDSNAAFDIVYANAVGLQVRLIRERRFDQKDLVE--GEQTLDLTGKVSFPVEWGAYRLEVKAPNTVSSVRFWAGYSW--------------------------------------------- |
8 | 6hg4B | 0.20 | 0.20 | 6.29 | 0.98 | CEthreader | | WALPWLNVSADGDNVHLVLQVSEEQHFGLSLYWNQVQGPPKPRWHKQLT--GPQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEQVTVDKVLLKGHPNLCVQVQSSEKLQLQCLWADSLGPLKDDVLLLETRGPQDQRSLCALEPSGCTSLPSKASTRAARLGEY |
9 | 5wlcLH | 0.09 | 0.08 | 3.28 | 0.59 | MUSTER | | NSQQFLPRLNGIIIDCQVLG-PQGNYYSLILQMTENNSNSDYQFLLLNASDLTSKLSINGPLPVFNSTIKHIQQPISAMNTKNSNSITSLNHSKKKQSRKLIKSRRQNVEINPINKNISAVQIFDFYKNEQVNYQYLTSGVNNSMGKVRFELNLQDPTDLKFTKDGYEIEYPPNDLLSSKDLTHILKFWTKNDNETNWNLKTKVINPHGISVPIT--SPRSVNN |
10 | 6hg4B2 | 0.28 | 0.12 | 3.55 | 3.40 | HHsearch | | PWLNVSADGDNVHLVLQVS---EEQHFGLSLYWNQVQPPKPRWHKQLT---GPQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAA---------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|