Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC MEKQRALVAAKDGDVATLERLLEAGALGPGITDALGAGLVHHATRAGHLDCVKFLVQRAQLPGNQRAHNGATPAHDAAATGSLAELCWLVREGGCGLQDQDASGVSPLHLAARFGHPVLVEWLLHEGHSATLETREGARPLHHAAVSGDLTCLKLLTAAHGSSVNRRTRSGASPLYLACQEGHLHLAQFLVKDCGADVHLRALDGMSALHAAAARGHYSLVVWLVTFTDIGLTARDNEGATALHFAARGGHTPILDRLLLMGTPILRDSWGGTPLHDAAENGQMECCQTLVSHHVDPSLRDEDGYTAADLAEYHGHRDCAQYLREVAQPVPLLMTPPPPPFPPPPLLATRRSLEDGRRGGPGPGNPSPMSLSPAWPGHPDQPLPRE |
1 | 5vkqA | 0.26 | 0.22 | 6.72 | 1.33 | DEthreader | | TVHTPLHIAARVDGDRCALMLLKSG-ASPNLTTDDCLTPVHVAARHGNLATLMQLLEDEGD-PLYKSNTGETPLHMACRACHPDIVRHLIETVHAYINSVNEDGATALHYTCQIVDKQIVRMLLENGADVTLQTTALETAFHYCAVAGNDVLMEMISHMNPIAMNRQSSVGWTPLLIACHRGHMELVNNLLA-NHARVDVFDTEGRSALHLAAERGYLHVCDALL-TNKAFINSKSRVGRTALHLAAMNGFTHLVKFLIKNAVIDILTLRKQTPLHLAAASGQMEVCQLLLELGANIDATDDLGQKPIHVAAQNNYSEVAKLFLHPSLV--------------------------------------------------------- |
2 | 5et0A | 0.55 | 0.46 | 13.29 | 2.90 | SPARKS-K | | MALEQALQAARRGDLDVLRSLHAAGL-----LDSLDALPVHHAARSGKLHCLRYLVEEVALPAVSRARNGATPAHDAAATGYLSCLQWLLTQGGCRVQEKDNSGATVLHLAARFGHPDVVKWLLYGGANSAITTDTGALPIHYAAAKGDLPSLKLLVGHYPEGVNAQTNNGATPLYLACQEGHLEVTKYLVQECSADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAEISQDLWGGTPLHDAAENGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQTLS-------------------------------------------------------- |
3 | 5et0A | 0.55 | 0.46 | 13.29 | 1.00 | MapAlign | | -ALEQALQAARRGDLDVLRSLHAAGLL-----DSLDALPVHHAARSGKLHCLRYLVEEVALPAVSRARNGATPAHDAAATGYLSCLQWLLTQGGCRVQEKDNSGATVLHLAARFGHPDVVKWLLYGGANSAITTDTGALPIHYAAAKGDLPSLKLLVGHYPEGVNAQTNNGATPLYLACQEGHLEVTKYLVQECSADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAEISQDLWGGTPLHDAAENGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQTLS-------------------------------------------------------- |
4 | 5et0A | 0.55 | 0.46 | 13.36 | 0.61 | CEthreader | | MALEQALQAARRGDLDVLRSLHAAGLL-----DSLDALPVHHAARSGKLHCLRYLVEEVALPAVSRARNGATPAHDAAATGYLSCLQWLLTQGGCRVQEKDNSGATVLHLAARFGHPDVVKWLLYGGANSAITTDTGALPIHYAAAKGDLPSLKLLVGHYPEGVNAQTNNGATPLYLACQEGHLEVTKYLVQECSADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAEISQDLWGGTPLHDAAENGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQTLS-------------------------------------------------------- |
5 | 5et0A | 0.55 | 0.46 | 13.29 | 1.95 | MUSTER | | MALEQALQAARRGDLDVLRSLHAAGLLD-----SLDALPVHHAARSGKLHCLRYLVEEVALPAVSRARNGATPAHDAAATGYLSCLQWLLTQGGCRVQEKDNSGATVLHLAARFGHPDVVKWLLYQGANSAITTDTGALPIHYAAAKGDLPSLKLLVGHYPEGVNAQTNNGATPLYLACQEGHLEVTKYLVQECSADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAEISQDLWGGTPLHDAAENGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQTLS-------------------------------------------------------- |
6 | 6skuA | 0.16 | 0.15 | 5.02 | 1.35 | HHsearch | | NEQYPLHRGAILSDPGEIKLLLSNES-QINQPIYVGKTPAHLAVISGNMAMLDELIAKK-ADLSLQDYDGKTALHYAAECGNMQIMGKILKVQEDAINIKDNHGKTAFHYAAEFGTPELISALTTTEIQINEPDNSGSSAITLAYKNHKLKIFDELLN-SGADISDELLDNKEAFRIAISLGSVSLVKKFLRA-GVDIDIPTKDKATPLMLSINSGNPKLVSYLLK-KGANTRLTDTSGNSVLHYVKAENREALANIITEKDKLIQPNANGNPPLYNAVVVNDLKMATILLEMGARVDFEDRLGNNILHSAMRRCDLPIILDIVKKDTLLH-----KRNSERRNPFHQALHEMHLSDLLLEGVDKDTILVKLMKAGAHTNI----- |
7 | 1n11A | 0.26 | 0.25 | 7.82 | 3.37 | FFAS-3D | | ---TPLHVASFMGHLPIVKNLLQRGA-SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA-KVNAKAKDDQTPLHCAARIGHTNMVKLLLEN-NANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER-DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG-GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVT---- |
8 | 6molA | 0.31 | 0.30 | 9.02 | 1.47 | EigenThreader | | DLGKKLLKAARAGQDDEVRILMANG-ADVNATDIWDATPLHLAALIGHLEIVEVLLKN-GADVNASDITGTTPLHLAATMGHLEIVEVLLKY-GADVNAYDLNGATPLHLAARMGHVEIVEVLLKYGADVNAQDAAGGTPLHEAARAGHLEIVEVLLKYG-ADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYG-ADVNAVDAAGGTPLHEAARAGHLEIVEVLLKY-GADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVG----TPLHKAARAGHLEIVEVLLKYGADVNATDIWDATPLHLAALIGHLEIVEVLLKNGADVNASDITGTTGADVNAYDLNGATP |
9 | 5et1A | 0.55 | 0.47 | 13.51 | 2.90 | CNFpred | | MALEQALQAARRGDLDVLRSLHAAGLLGPSLRDSLDALPVHHAARSGKLHCLRYLVEEVALPAVSRARNGATPAHDAAATGYLSCLQWLLTQGGCRVQEKDNSGATVLHLAARFGHPDVVKWLLYQGANSAITTDTGALPIHYAAAKGDLPSLKLLVGHYPEGVNAQTNNGATPLYLACQEGHLEVTKYLVQECSADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAEISQDLWGGTPLHDAAENGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQ----------------------------------------------------------- |
10 | 4rlvA | 0.30 | 0.25 | 7.47 | 1.33 | DEthreader | | FTITPLHVASKRGNTN-VKLLLDRGGQID-AKTRDGLTPLHCAARSGHDQVVELLLER-GAPLLARTKNGLSPLH-AAQGDHVECVKHLLQ-HKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKV-ELLVK-YGASIQAITESGLTPIHVAAF-GHLNIVLLLLQ-NGASPDVTNIRGETALH-AARAGQVEVVRCLLRNG-ALVDARAREEQTPLHIASRLGKTEIVQLLLQHAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAA-------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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