Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
| | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHCHCCCCCCCHHHHHHHHHCHHHHHHHCHHHHHCCCCCCCCHHHHCC MANQLRERHQSLKKKYRELIDGDPSLPPEKRKQANLAQLLRDSQDRNKHLGEEIKELQQRLGEVQGDNKLLRMTIAKQRLGDEAIGVRHFAAHEREDLVQQLERAKEQIESLEHDLQASVDELQDVKEERSSYQDKVERLNQELNHILSGHENRIIDVDALCMENRYLQERLKQLHEEVNLLKSNIAKYKNALERRKNSKGQGKSSSSALTGVLSAKQVQDLLSEDHGCSLPATPQSISDLKSLATALLETIHEKNMVIQHQRQTNKILGNRVAELEKKLRTLEVSGLWSLPGGKDTILFSDPTLPSGQRSRSPLLKFVEQPTENKADPKDGEAQKQEEDESCAAAEALTAPEDAGRPAVNSPANQSRGNQCKLFHPSLPQLPSEEEVNSLGREIIKLTKEQAAAELEEVRRESPIEGQRSETGPAPPGLAIQGELPKSHLDSFEASRPAAKASTPEDGKGIPEGGGMRSTVKT |
1 | 1vt4I | 0.09 | 0.09 | 3.34 | 0.56 | CEthreader | | VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 7kogB | 0.08 | 0.08 | 3.05 | 0.77 | EigenThreader | | QTLDELEDSLEREKKLRGDVEKAKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKEIASLTAKLEDEQSIVSKTQKQIKELQSRIEELEEEVEAERQARGKAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAEMSKLRRDLEESNIQHESTLANLRKKHNDAVSEMGEQIDQLNKLKTKAEHDRTHVQNDLNNTRHALDQMCREKAATEKIAKQLQHQVNEIQGKLDEANRTLNDFDSAKKKLSIENSDLLRQLEEAESQVSQLSKIKVSLTTQLEDTKRLADEEARERATLLGKFRNLEHDLDNIREQLEEEAEGKADIQRQLSKANAEAQLWRTKYESEGVARAEELEEAKRKLQARLAEAEETIESLNQKVIALEKTKQRLATEVEDLQLEVDRATAIANAAEKKAKAIDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEAQEQLEAVRREN |
3 | 2tmaA | 0.15 | 0.09 | 3.04 | 1.09 | FFAS-3D | | --DAIKKKMQMLKLDKENA----------LDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQ-------------EKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESER-------GMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEE-------------------VARKLVIIESD-----LERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLS----------------------------------------------------DKLKEAETRAEFA-----------------------------------ERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTS------------------------------------------------- |
4 | 6yvuB | 0.10 | 0.10 | 3.60 | 0.95 | SPARKS-K | | TALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDK----------TKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVLEEKILAKKTHKQELLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNGDLGVIDPRLDDVVVDTVECAQLGYARFILLDRLRQFNLQPISTPENDLVKPKNPKFSNAFYSVLRAYGKKRFTVDGKLIDISGTNHVAKGLMKLKVDDERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSDKAQLNVVMKNLERLRGE |
5 | 5j1iA | 0.09 | 0.04 | 1.70 | 0.95 | CNFpred | | ELKDIRLQLEACETRTVHRLRLPL--------DKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAL-----------------SPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQ--VPAELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGE----------DVEVERWRERVAQ--------LLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6z2wE | 0.06 | 0.04 | 1.58 | 0.67 | DEthreader | | -----------R--GS--KA---------CVEFYG-KPAKFQLTAHFENTMNLYEQALTEVLL-G-KT-----------------------------EL-LKFYDTLKGLYILLYWFTSEYSTFG----------------------------------------------------------------------------AALEYAEIQLKYISVVVLTTMHHFLDNKYGLLDEPFTQLTNKALDYKQLEKL--L---LY--QT-SVSLLSGLFLRLLSTIILKFLQSQKLDINSDRLLLGNLVERKVGF--L-I----KNSKDSANLNEIYAPKKS-I--NDEELSTVITLIKEKSD--------------L-LKLKPYTAQNDDIEVYLRRKQTRILDYRMERAK-TQQLEAEVQEIHEKYQENS-----------LLKFTEWLDLSNN-VLALMIRGLSVAGQ------- |
7 | 1vt4I | 0.07 | 0.07 | 2.99 | 0.95 | MapAlign | | -KDILSVFEVDNFDCKDVQDMPKSILSKEEIDHIIMSSGTLRLFWTLVQKFVEEVLRINYKFLMSPTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLENSPETVLEMLQKLLYLRIHSIQAELRRLLKSRLSIIAESIRDATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLSDDLIPPYLDQYFYSHIGHHLKNINTLQQLKFYKPYICDNDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
8 | 4uxvA | 0.08 | 0.08 | 3.20 | 0.88 | MUSTER | | IYAEIDRLESWKIEILNRSIVEESKIKHLKMTGQTEEFFEKWREEWDEIVTAHMPKVEELLYDAEE-FKKANQVLVHIDDLLTAA------ESSIEKILREISDLVTSEEKSREEIEQVRERYSKSRKYSHLYGELYDSLEKDLDEIWYITARKV--LLEQDRNLERLQSYIDDVPKLLADVPGQIAKLKDGYGEMKEKGYKLEHIQLDKELENLSNQLKRAEHVLTELDIDEASAILQLIDENIQSVYQQLEGEVEAGQSVLSKMPELIIAYDKLKEEKEHTKAKESYRLTAGLGKQQAFEKRLDEIGKLLSSVKDKLDAEHVAYSLLVEEASIEKQIEEVKKEHAEYRENELQARETLSNLKKTISETARLLKTSNIPGIPSHEMLENAHHHIQETVNQLNELPLNMEEAGAHLKQAEDIVNRASRESEELVEQVILIEKIIRSQNHILSEQLKEAERRFYAFD--DDSYEI |
9 | 3na7A | 0.14 | 0.07 | 2.25 | 0.65 | HHsearch | | SNTHLKQLISHLDKEIDSLEPLIREKR---KDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEI----KSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESL----------VENEVKNIKETQQIIFKKKEDLPKIYSFYERIRRWAKN-TSIVTIKKQ----------------ACGGCFIRLNDKIYTEVLT-----------------------------------------SGDMITCPY-CGRILYAEGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 2w6dA | 0.06 | 0.06 | 2.70 | 0.44 | CEthreader | | RASQPCTLGERRYLENYIKGRGLTQVRESLIDPDDVEELQASENRLRQVFNANLAEYCTVEGQNIYDERVFELSSIQALRRRLKNPQADLDGTGFPKFMDSLNTFLTRERAIAELRQVRTLARLACNHTREAVARRIPLLEQDVNELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNT-----FENDFLRYQPELNLFDFLSSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITEKLTGKDVEDNSPGWAKWAMGLLSLSKGNLAGFALAGAGFDWKNILLNYFTVIGIGGIITAVTGILLGPIGFALLGLGVGFLQADQARRELVKTAKKELVKHLPQVAHEQSQVVYNAVKECFDSYEREVSKRINDDIVSRKSELDNLVKQKQTREINRESEFNRLKNLQEDVIAQLQKIEAAYSNLLAYYSHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|