Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCSSSSSCCCCCCCSSSSSCCCCCCSSSSSSSSCCCSSSSSCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAQPEDKAPEVPTEGVRLVPPQVNKADRTPLGVLSTLEPLTRLQRTWGVWHVPELDTQDAEALVGLWPLGSFLVTGRDPSQALVLRSGPLPGEVNTYQIQKIPRGVSLESSNLCMPDLPHLLAFLSASRDVLPRTLLLPPPTLGPRDEHTDPVQIGRVQQDTPGKVLSIVNQLYLETHRGWGREQTPQETEPEAAQRHDPAPRNPAPHGVSWVKGPLSPEVDHPGPALASLLEEEEEDLEGKEEGREDDPEEEGPEDVLTIHVQSLVRARSSYVARQYRSLRVRIASDSGGPHGSGDPATELLQDVRHLLTDLQDHLAKDSYIRAVFGSRGPGLPKKDEDPGPALETAVCQAVLAPLKPALWTRLRTLRAPELRRLRRRQTALRAGAGPPGAQGPGPEGQSPAPALRSRIHERLAHLHAACAPRRKVALLLEVCRDVYAGLARGENQDPLGADAFLPALTEELIWSPDIGDTQLDVEFLMELLDPDELRGEAGYYLTTWFGALHHIAHYQPETDRAPRGLSSEARASLHQWHRRRTLHRKDHPRAQANLPFKEPWAEETVTGTSDN |
1 | 2efcA | 0.14 | 0.06 | 2.05 | 0.72 | CEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRKPSAGDFVKSIKSFIVSF-------SNNAPDPEKDCAMVQEFFSKMEAAFRAHPLWSGC-----------SEEELDSAGDGLEKYVMTKLFTRVFASN-TEEVIADEKLFQKMSLVQQFISPEN---LDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIENAPGADEFLPVLIYVTIKA-NPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFISNIDAKSISLDEAEFEKNMESARAR----------------------------------- |
2 | 6f1te | 0.07 | 0.07 | 2.73 | 1.33 | EigenThreader | | VQNVADVSVLQKHLRKLVPLLLEDGGEAPAALEAALEEKSALEQMRKFLSDPQ-------------VHTVLVERSTLKEFISYNINIDIHYGVKSNSFIKRTPVIVLTLSEDSSFISNAVAPFFKSYIRESDKMAPSVEKKIAELEMGLLHLQQNIEI-------------------PEISLPIHPMITNVAKQCYERGEKPKVTDFLDRDPASGTALQEISFWLNLERALYRIQEKRESKRFHTDTGLKQALETVNDYNPLMKDLLSATELDKIRQALVAIFTHLRKIRNTKYPIQRALRLVEAISRDLSSQLLKVLGT------------RKLMHVAYEEFEKVMVACFEVFQTWDDEYEKLQVLLRDIVKRKRARLDQMRKFRRQHEQLRAVIVRVANAIEEVNLAYENVKEVKEGTEAWEAAMKRYDERIDRVETRITARLRDQLGTPHIRGAIREYQTQLIQRVKDDIESLHDKFKVLPPVSGSIIWAKQIDRQLTAYMKRVEDVLGKGWENHVEGQKLKQDGDSFRMKLNTQEIFTIESTRVRGRTGNVLKLKVNFLPEI |
3 | 2efcA | 0.14 | 0.06 | 2.05 | 1.47 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRKPSAGDFVKSIKSFIVSF-------SNNAPDPEKDCAMVQEFFSKMEAAFRAHPLWS----------GCSEEELDSAGD-GLEKYVMTKLFTRVFASNTEEVIADEKLFQKMSLV----QQFISPENLDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASNENAPGADEFLPVLIYVTIKA-NPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFISNIDAKSISLDE---AEFEKNMESARAR-------------------------------- |
4 | 6r9tA | 0.09 | 0.06 | 2.17 | 0.67 | DEthreader | | ----------TSNVASATTIPLLVQSCKAVAEQIPLLVQAASQSFLQPGGKMVACAKNLGTALAE-------L-R------TAA-----------QKAQE-------A----CGP-LEMDSALSVVQNLEKD----DLNSTKAVSSAIAQLLGEVQGNEN------YAGIAADTAKRQFVQSA--A--------------ARLANPRDPPS--V------------------------D---------ETAIAALNSCLRDLDQASPRISQLHAGAASKTL--S--------------------H--PQQMALLDQTKT-L-AESALQLLYTAKEAGGQLEAVMMTEAVEDLTTTETAPQL--D--SAVSGIIADLDTTIFTLNREEDHEGITSVATITAVVKLGAASLGAEDPET-------------VL-NAV-DV--AL---I-KSAKVMTNV-SL--T-------------ALEATTEHIRQELAVFCSPE-PA--ST-ED-F---------IRMTKGIAIDMLACKALRALHYGR--------AAMKGTEWVDPE------ |
5 | 2efcA | 0.15 | 0.06 | 2.15 | 1.04 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRKPSAGDFVKSIKSFIVSF-------SNNAPDPEKDCAMVQEFFSKMEAAFRAHP-----------LWSGCSEEELDSAGDGLEKYVMTKLFTRVFAS-NTEEVIADEKLFQKMSLVQQFISP---ENLDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASNENAPGADEFLPVLIYVTIKAN-PPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFISNIDAKSISLDE---AEFEKNMESARAR-------------------------------- |
6 | 1vt4I | 0.08 | 0.08 | 3.04 | 1.82 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--G--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
7 | 2ot3A | 0.14 | 0.06 | 2.05 | 1.22 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FIEFLKTFHKT-GQEIYKQTKLFLEGMHYK--------LSIEEQSECAQDFYHNVAERMQTRGKVPP--------------ERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALRW-VTPQMLCVPVNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITK-NEPASADDFLPTLIYIVLKGN-PPRLQSNIQYITRFCNPSRLTGEDGYYFTNLCCAVAFIEKLD------AQSLNL-SQEDFDRYMS--------------------------------- |
8 | 6n7pX | 0.05 | 0.04 | 2.05 | 1.18 | EigenThreader | | NNVAGKSIINYFFEELQKWCKQTYNDEFKSTSNETGPWNKIKLILRFLSILSPMFLVDELINIYKSLFELS----------------IELNN-----------LD---PGNRVPLSEAIYTNTLLNIPYLFFPYEMVELVRVVLPNVKKALINPDWNHLLTPQTGDEGFNDALTLPSVDDLKSFVRLNKNFGSVDSMWKTPRYAFHVYLPNSAGNFETVVPISFFKAGIFTEPGESIAQLIATYEENPLAPTFKIEDLAIETILGLIFKLQPFAYFYTLLVDICQN------SPKAIAPVFGRAFRFFYSHELKLRYLDWFSIQMSNFNFSKFGKYFYNPKVNFAKNLIQKELRLTSN--------------FSEVEDSLTKYLDTSSVRKNDLYFRQEGVPMENTVRKILDY-------------TREVTELESILGELKNEYGSIISDFNRFVIILLVQAVTDSGSLSHANKYINDL---KEDLKTIFAKDIETKEYIIIEAVLTFW---------NANPQTGFLVADAFKYA----GLLTSRTIFTFIFNETGLKNNGLIEAT |
9 | 2efcA | 0.15 | 0.06 | 2.15 | 1.00 | MUSTER | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRKPSAGDFVKSIKSFIVSF-------SNNAPDPEKDCAMVQEFFSKMEAAFRAHPLWS-----------GCSEEELDSAGDGLEKYVMTKLFTRVFASN-TEEVIADEKLFQKMSLVQQFISPEN---LDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASNENAPGADEFLPVLIYVTIKA-NPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFISNIDAKSISLDE---AEFEKNMESARAR-------------------------------- |
10 | 1vt4I3 | 0.08 | 0.07 | 2.64 | 1.63 | MapAlign | | --EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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