Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCHHHHHHCCCCCCCCCCHHHCCCCCCCCSCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHSSCCSSSSSHHHHHHHCCCCSSSSCCCCCCCSSCCCCCCCCCHHHHHHCCCCCHHHHHHCCCSSSSSCCCCCCCCCHHHCCCCCCCCCCCCC MQSVDSMLGTVGGCGGGEAASTFSKDPSGCCVGNDCRDGGRGLERRHGRWSRGEGGESGLCSGGQMASEIEYWDGLAISVMEVEKAFGSTNVLWKTEPFSLWACTAACPPSLSPTLLALGLPRDGKELAEQGSLWTVLEPGGDWSHSQSQLGTPGRGKGALGF |
1 | 5e6rA2 | 0.12 | 0.12 | 4.11 | 0.64 | CEthreader | | FNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPL------TPEVRAGYLGYTVTWLQKTSLLASGAPRYQHMGRVLLFQEPQVQTIHGTQIGSYFGGELCGVDVDQDGEGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGE |
2 | 4zlhA | 0.06 | 0.06 | 2.66 | 0.55 | EigenThreader | | LTLGNLFRSRGEVDRAIRIHQTLMESASQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADRVSIMMGRVFMAKGEYAKAVESLQRVISQDRELVS |
3 | 1udxA | 0.25 | 0.23 | 7.04 | 0.28 | FFAS-3D | | ---QDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGLSKRTYKAEDGEHGRGSQQHGRGGEDVIEVPRGTRVFDADTGELLGQTVLVARGGAGGRGNMHFVSPTRQAPRFAEAGEE------GEKRRLRLELMLIAD----VGLVGYPNAGKSSL-- |
4 | 7jjvA | 0.20 | 0.15 | 4.90 | 0.90 | SPARKS-K | | --MQCDGLDGADGTSNGQAGASGLAGGPNC-NGGKGGKGAPGVGTAGGAGGVGGAGGTGNTNGGAGGSGGN----------------------SDVAAGGAGAAGGAAGGAGTGTGGNGGAGKPG------------GAPGAGGAGTPAGSGSPGQTTVL--- |
5 | 3prlA | 0.15 | 0.06 | 1.87 | 0.54 | CNFpred | | ---------------------------------------------------------------------------VNLAAAKIAPALVGNTVVFKPATQGSLSGIK-----MVEALADAGAP---------EGIIQVVTG--RGSVIGDHLV----------- |
6 | 2a8iA | 0.06 | 0.04 | 1.90 | 0.83 | DEthreader | | -GF-VL----------------------V-HAGAGYHSKAKEYKVCKRLEDSP--FTNAGSNTLDTVGAVVVDGNV-AAAVSSGGLKRVGQALYWAENSTAVS--TSGCGHLILARECSHLQAEDAQALLETQN--K-------F--SPFLAS--GVLGGSHI |
7 | 7kwoV2 | 0.09 | 0.09 | 3.28 | 0.92 | MapAlign | | ------ERCPCFHQGKEYAPGETVKIGCNTCVCRDDHVCDATCSTIGMAHYLTFDGLKYLFPGECQYVLVQDYPGTFRILVGNKGCSVKCKKRVTILVEEIELFDGEVNVKRPMKDHFEVVESGRYIILLLGKALSVVWDRHLSISVVLKQTYQEKVCGLCGN |
8 | 2vbeA4 | 0.13 | 0.12 | 4.28 | 0.48 | MUSTER | | IGFKNAV--YVHDCLDLHEQLDLDYCGSTGVVIENVNGGFSFSN----SWIAADADGTEQFTGIYFRTPTSTQSHKIVSGVHINTANAANNQSIAIEQSAIFVFVSGCTLTGDEWAVNIVDINECVSFDKFNKPLRYLRSGGCYLAGITEVQKPGRYRGCSGV |
9 | 2eelA | 0.26 | 0.10 | 3.21 | 0.60 | HHsearch | | ---------------------------------------------------------------------------------------GSSGSSGPARPFRVSNHDRSSRSSLQEGLVTLVLEEDGTVVDGDNTHFMILEKGQKWMPSGPSSG----------- |
10 | 5mxeA | 0.09 | 0.09 | 3.48 | 0.64 | CEthreader | | YANTDGRLEVFARGADNALWHISQTTAHSGPWSSWASLNGVITSNPTVVFARGTDNALWHIWQNLWSSWESLNGIITSDPVVIDTADGRLEVFARGAALWHIWQTISHSGPWSGWQSLNGVITSAPAVAKNCDEAFARGTDNALWHTWQTVSHSGPWSSWQSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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