Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCSSSSSSSSSCCHHHHHCCCHHHHHHHHHHHCHCCCCCCCCCCCCCCCCSSSSCSCCCCCCCCCCCCCCCCCCCCCCCCSSCCSCCCCCSSSCCCCCCSSSSCCCCCCCCCCCCCCCCSSCCCCCCCHHHCCCCCCCCSSCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSSCCCCCCCCSSCCSCCCCCSCCCCCCCSSCCCCCCCCSSCCSCCCCCSCCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCCC MHSLKKVTFEDVAIDFTQEEWAMMDTSKRKLYRDVMLENISHLVSLGYQISKSYIILQLEQGKELWREGREFLQDQNPDRESALKKKHMISMHPITRKDASTSMTMENSLILEDPFECNDSGEDCTHSSTITQRLLTHSGKKPYVSKQCGKSLRNLFSPKPHKQIHTKGKSYQCNLCEKAYTNCFRLRRHKMTHTGERPYACHLCGKAFTQCSHLRRHEKTHTGERPYKCHQCGKAFIQSFNLRRHERTHLGKKCYECDKSGKAFSQSSGFRGNKIIHTGEKPHACLLCGKAFSLSSDLR |
1 | 5v3jE | 0.31 | 0.21 | 6.25 | 0.83 | DEthreader | | ----------------------------------------------------------------------------------------------SLHHRVHKCFECKPLLRQRTEKPHKCGKAFR----Y-DTQLSLHLLTARRFECKDCKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELS |
2 | 5v3jE | 0.28 | 0.25 | 7.53 | 5.64 | SPARKS-K | | ---------------------------------------PHKCKECGKAFHTHHQKLHVGEKPYKCQECGKAPSNAQLSLHHRVHTDEKCFECKECGMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELS |
3 | 5v3jE | 0.28 | 0.24 | 7.45 | 1.50 | MapAlign | | -------------PHKCKECGKAFTPSQLSHHQKLHVGEKPYKCQECGKAFPLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRI----------------------HTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELS |
4 | 5v3jE | 0.27 | 0.24 | 7.38 | 0.93 | CEthreader | | -------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIH-----------------------TGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELS |
5 | 5v3jE | 0.29 | 0.26 | 7.91 | 3.67 | MUSTER | | ------------------------------PHK----KECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELS |
6 | 5v3jE | 0.34 | 0.27 | 8.18 | 1.82 | HHsearch | | --------------------------------------PHKCKE-CGKAFHTP---SQLSHHQKL----------------HVGEK---PYKCQECGKAFPQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELT |
7 | 5v3jE | 0.33 | 0.27 | 8.00 | 2.30 | FFAS-3D | | ------------------------------------------------------------KCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSEL- |
8 | 5v3jE | 0.32 | 0.25 | 7.43 | 1.47 | EigenThreader | | ----------------------------------------------PHKCKE---------------------CGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPVHTDEKCFECK---ECGKARPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELT |
9 | 5v3mC | 0.32 | 0.22 | 6.53 | 4.32 | CNFpred | | ------------------------------------------------------------------------------------------------FHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELF |
10 | 3p8cB | 0.04 | 0.03 | 1.59 | 0.83 | DEthreader | | ---ALNWKLALQSSCLFIAAELFYRINDIRECKEAAVSHAGSHRERKILLRHADNMP-----------IFCFYSRAFEKMFQLSFEMAKARITCQCLSDAYMTVLQSIEIDITRVF-------NNVLLQQQHLDSHG---EPT---------TSLY-NW-LETLLRQ--N-HIAVNLPTNELTFNAEEYS-DI---SEMR---------SLAQEALRDSVSIEDFKDHDMKVAMNVYPCEIDPLV-L---EYKACMVAV----EDRLEFLALASSSLLKIGQRES-------CFPYVLLR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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