Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCHHHHHHHHCCCCCCCCCCSSSSSCCCHHHHHHHHHHHHCCCCCSSSSSSCCCCCCHHHHHHHHHCHCCCCCCSSSCCCCHHHHCCCCSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSSSSSCCCHHHHHHHHHHHHCCCCCCCC MATIKSELIKNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGSPFMKMPNIVSSKDYLVTANSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYSPHCKLLIVTNPVDILTYVAWKLSGFPKNRVI |
1 | 1lldA1 | 0.39 | 0.34 | 10.05 | 1.33 | DEthreader | | -------------------PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIF |
2 | 9ldbA1 | 0.72 | 0.71 | 20.18 | 1.35 | SPARKS-K | | -ATLKDQLIHNLLKEEHVPHNKITVVGVGAVGMACAISILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVI |
3 | 1uxiA1 | 0.39 | 0.34 | 10.04 | 0.58 | MapAlign | | -------------------RKKISIIGAGFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFVRVTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPKERVI |
4 | 1uxiA | 0.39 | 0.34 | 10.04 | 0.49 | CEthreader | | -------------------RKKISIIGAGFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEFDVRVTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPKERVI |
5 | 9ldbA1 | 0.72 | 0.71 | 20.18 | 1.65 | MUSTER | | -ATLKDQLIHNLLKEEHVPHNKITVVGVGAVGMACAISILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVI |
6 | 9ldbA | 0.72 | 0.71 | 20.18 | 0.69 | HHsearch | | -ATLKDQLIHNLLKEEHVPHNKITVVGVGAVGMACAISILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVI |
7 | 9ldbA1 | 0.72 | 0.71 | 20.18 | 2.20 | FFAS-3D | | -ATLKDQLIHNLLKEEHVPHNKITVVGVGAVGMACAISILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVI |
8 | 9ldbA1 | 0.72 | 0.71 | 20.18 | 0.62 | EigenThreader | | -ATLKDQLIHNLLKEEHVPHNKITVVGVGAVGMACAISILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVI |
9 | 5nqbA | 0.72 | 0.71 | 20.18 | 1.54 | CNFpred | | -AALKDQLIHNLLKEEHVPQNKITVVGVGAVGMACAISILMKDLADELALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPHCKLLVVSNPVDILTYVAWKISGFPKNRVI |
10 | 1lldA | 0.39 | 0.34 | 10.05 | 1.33 | DEthreader | | -------------------PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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