Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCSSSSSSSSSSSSCCCCSSSSSSSSSSCCCCCCCCCCCCCSSSSSSSCCCCSSSSSSSSSCCCCCCSCCSSSSSSCHHHCCCCSSSSSSSSCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCSSSSSSSSSCCCSSSSSCCCSSCCCCCCSSCCSSSSSSCCCCCCCCSSSSSSSSCCCCCCCCSSSSSSSCCCCCCHHHHHHHHHHHCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCC MSFHKEDGVNSLCQKALHIVTELCFAGQVEWEKCSGIFPRDRGSQGGSSTDISVSLLAVVVSFCGLALLVVSLFVFWKLCWPCWKSKPVTSNITTLPQSISSAPTEVFETEEKKEIKENEKPAVKAIEPAIKISHTSPDIPAEVQTALKEHLIKHARVQRQITEPTSSTRHSSFRRHLPRQMQVSSVDFSMGTEPVLQRGETTTSIGRIKPELYKQKSVDSEGNQNEDVKICGKLNFTLQYDYENELLVVKIIKALDLPAKDFTGTSDPYVKMYLLPDRKKKFQTRVHRKTLNPLFDETFQFPVAYDQLSNRKLHFSVYDFDRFSRHDMIGEVILDNLFEVSDLSREATVWKDIHCATTESIDLGEIMFSLCYLPTAGRMTLTVIKCRNLKAMDITGSSDPYVKVSLMCEGRRLKKRKTTTKKNTLNPVYNEAIIFDIPPENVDQVSLSIAVMDYDRVGHNEVIGVCRTGLDAEGLGRDHWNEMLAYHRKPITHWHPLLELPGRATSFDSQGSCPSPKPPSTP |
1 | 6ankA | 0.33 | 0.14 | 4.13 | 0.67 | DEthreader | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N-LGRIQFSVG------------TVKVMKAQELPA---GTSDPFVKIYKK---KLETKVKRKNLNPHWNETF--------------LYLQVLDY-----NDPIGEVSI-------------M-TFWKDLKP----SRGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLK------------------------ |
2 | 3hn8A | 0.64 | 0.34 | 9.77 | 3.09 | SPARKS-K | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADHGREHWAEMLANPRKPVEHWHQLVEEKTLSS----------------- |
3 | 2r83A | 0.49 | 0.26 | 7.55 | 1.26 | MapAlign | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPM--NTVDFGHVTEEWRDLQSAEKEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAML--------------- |
4 | 2r83A | 0.49 | 0.26 | 7.55 | 0.67 | CEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVP--MNTVDFGHVTEEWRDLQSAEEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLA-------------- |
5 | 3hn8A | 0.64 | 0.34 | 9.77 | 1.93 | MUSTER | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEADPHGREHWAEMLANPRKPVEHWHQLVEEKTLSS----------------- |
6 | 3hn8A | 0.64 | 0.34 | 9.77 | 2.62 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEADPHGREHWAEMLANPRKPVEHWHQLVEEKTLSS----------------- |
7 | 3hn8A | 0.64 | 0.34 | 9.77 | 2.67 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADHGREHWAEMLANPRKPVEHWHQLVEEKTLSS----------------- |
8 | 2r83A | 0.49 | 0.26 | 7.55 | 1.23 | EigenThreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKV--PMNTVDFGHVTEEWRDLQSAKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLA-------------- |
9 | 2r83A | 0.50 | 0.26 | 7.54 | 3.77 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPM--NTVDFGHVTEEWRDLQSAEEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEE-------------------- |
10 | 2r83A | 0.35 | 0.14 | 4.23 | 0.50 | DEthreader | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YSLDYDF-N----------------------N-QLLVG----------------------I-I---------QAAEL-----------------SDPYVETKVHRKTL---------------NPV------FNEQF-MAVYD------HDIIGEFKV-------------TEEWRDLQAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEE-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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