Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHSSHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MNSGREPRTPRTLLSIADILAPRMVPRAPSAPQLPESGPGPTSPLCALEELTSKTFRGLDARALQPSEGRAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADVASLRALSPEVLCSLALPEGAPDPGLCLGPAGPDSRPHLSDEEIQVDD |
1 | 1pufA | 0.37 | 0.14 | 4.20 | 1.13 | FFAS-3D | | ------------------------------------------------------------------------NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR--------------------------------------------------- |
2 | 1pufA | 0.36 | 0.14 | 4.21 | 1.47 | SPARKS-K | | ------------------------------------------------------------------------NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRAK------------------------------------------------- |
3 | 6wkrC2 | 0.06 | 0.06 | 2.60 | 1.05 | MapAlign | | PGALPPECTPNIDGPNAKSVQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNTYKRKNTETALDNKPCGPQCYQHLEGAKEFAAALTPPEEWSGAEASMFRVLIGT---Y-YDNFCAIARLITKTCRQVYEFRVKSSHRLWAAHCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQNFCEKFCQCSSEC--- |
4 | 1gt0C | 0.19 | 0.13 | 4.23 | 1.21 | MUSTER | | ----PSDLEELEQF-AKTFKQRRIKLGFTQGDLAMGKLYGNDFSQTTISRFEALNLSFKNMSKLKPLLEKWLNDAENLG--LSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFSNRRQKEKR-------------------------------------------------------- |
5 | 2cufA | 0.24 | 0.10 | 2.99 | 1.42 | HHsearch | | ------------------------------------------------------------------------------GSSGSSGRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACRVTSLKVYNWFANRRKEIKRRANIAA--ILESSGP----------SSG---------------------------- |
6 | 1qryA | 0.42 | 0.16 | 4.60 | 1.12 | FFAS-3D | | -------------------------------------------------------------------------GSHMSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLTSLIRLTPTQVKIWFQNHRYKTKRAQNE---------------------------------------------------- |
7 | 3a01A | 0.47 | 0.19 | 5.44 | 1.40 | SPARKS-K | | ---------------------------------------------------------------------ARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEE--------------------------------------------------- |
8 | 6wkrC | 0.06 | 0.06 | 2.60 | 1.05 | MapAlign | | PGALPPECTPNIDGPNAKSVQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNTYKRKNTETALDNKPCGPQCYQHLEGAKEFAAALTPPEEWSGAEASMFRVLIGT---Y-YDNFCAIARLITKTCRQVYEFRVKSSHRLWAAHCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQNFCEKFCQCSSEC--- |
9 | 2d5vA | 0.20 | 0.13 | 4.22 | 1.18 | MUSTER | | ---MEEINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQG------TLSDLLRNPKPWSKLKSGRETFRRMWK-QEPEFQRMSALRLPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDK------------------------------------------------------- |
10 | 2dmtA | 0.45 | 0.18 | 5.31 | 1.42 | HHsearch | | --------------------------------------------------------------------GSSGSSGGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKSGPSSG-------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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