Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CSSSSCCCCSSSSCCCCSSSSSSSSSCCCCSSSSSSCCSSCCCCCCCCSSSSSCCCCSSSSCCCCHHHCSSSSSSSSSCCCSSSSSSSSSSSSCCSSSSCCCCSSSSCCCCSSSSSSSSSCCCCSSSSSSCCSSCCCCCCSSSSCCCCSSSSCCCCCCCCSSSSSSSSSCCCSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCSSSSCCSSSSSSSSCCCCCCSSSSSSCCCSSCCCCCCSSSCCCCSSCCCCCSSSSCCCSSSSSCCCSSSSCCCCSSSSSSSCCCCSSSSCCCCCSSSSSSCCCCCSSSCCCCCSSSCCCCCCCCSSSSSSSCCCCCSSSSSCCCCCCCSSSSSSCCCCCSSCCCCSSSSCCCCCCSSSSSSSSSCCCCCCCCSSSSSSSCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCC PSFTKTPMDLTIRAGAMARLECAAVGHPAPQIAWQKDGGTDFPAARERRMHVMPEDDVFFIVDVKIEDIGVYSCTAQNSAGSISANATLTVLETPSFLRPLLDRTVTKGETAVLQCIAGGSPPPKLNWTKDDSPLVVTERHFFAAGNQLLIIVDSDVSDAGKYTCEMSNTLGTERGNVRLSVIPTPTCDSPQMTAPSLDDDGWATVGVVIIAVVCCVVGTSLVWVVIIYHTRRRNEDCSITNTDETNLPADIPSYLSSQGTLADRQDGYVSSESGSHHQFVTSSGAGFFLPQHDSSGTCHIDNSSEADVEAATDLFLCPFLGSTGPMYLKGNVYGSDPFETYHTGCSPDPRTVLMDHYEPSYIKKKECYPCSHPSEESCERSFSNISWPSHVRKLLNTSYSHNEGPGMKNLCLNKSSLDFSANPEPASVASSNSFMGTFGKALRRPHLDAYSSFGQPSDCQPRAFYLKAHSSPDLDSGSEEDGKERTDFQEENHICTFKQTLENYRTPNFQSYDLDT |
1 | 1ry7B | 0.26 | 0.09 | 2.87 | 1.58 | FFAS-3D | | PYWTRPKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
2 | 6iaaA2 | 0.15 | 0.14 | 4.61 | 1.53 | SPARKS-K | | PQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQRCSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTGATISKNYDLSDLPGPPSKPQVTDVVTLSW---------------------------QPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLF-----VRAINPQG------------LSDPSPSDPVRTQDISPPAQGVDHRQVQKELGDVLVRLHNP----VVLTPTTVQVTWTVDRQPQFIQGYRVYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYENEFQGDSESKTEEAPSAPPQSVT--VLTVGTSDPPPPDHQNGILGNETRFHINKTVDAAIRGGLFPGIEVAAS---TSAGVGVKSEPQPIII |
3 | 4u7mA | 0.71 | 0.26 | 7.31 | 2.64 | CNFpred | | PSFTKTPHDITIRTTTMARLECAATGHPNPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDAGVYSCTAQNSAGSISANATLTVLETPSLVVPLEDRVVSVGETVALQCKATGNPPPRITWFKGDRPLSLTERHHLTPDNQLLVVQNVVAEDAGRYTCEMSNTLGTERAHSQLSVLLENLY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 3b43A | 0.18 | 0.17 | 5.49 | 1.22 | MUSTER | | PYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPA-YKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKEPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHE--VPPFFDLKPVSVD---LALGESGTFKCHVTGTAPIKITWAKD------NREIRPGGNYKM-----TLVENTATLTVLK---VTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQYECKIGGSPEIKVLW--YKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVRKKPHPVETLKGADVH-ELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHLNVDSAIGEDVGSDTCVGSITLKAPPRFVKKLSD-------STVVGEEVQLQATIEGAEPISVGEIVRES |
5 | 3b43A | 0.15 | 0.15 | 4.97 | 0.44 | CEthreader | | PYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKE-HTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVGTFKCHVTGTAPIKITWAKDNREINYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQ |
6 | 1q5cA | 0.07 | 0.06 | 2.43 | 0.83 | EigenThreader | | ---DWVIPPIKVRGPFPKRLVQIKSNKDRFNSITGQGADNPPQGV---FRIEWE-TGWMLVTRPLDREEYVLSSHAVSENGEPMEITINVIDQNDNRPKFTQDVFVREGVQPAVTDEDSLNGVLSYSIKQDPEEPIPNL-FTINRETGVISLIGTGLDREYTLTVQATDLGLSVEGKAIIQITDANDNAPIFDPNEIGFVTDLDM--------------------------PGTPAWQKIRVNEGGFPESNQGILTTAKGLDFELRKQVENAEPFSVPLPTSTNEAPFFVPAVDVSE---DLSRGISLV-----AQDPDKQQIQKLYFIGNNKDNGIVTGNGNLDRESEYVVTDDGVSVGTGTGTLILHVLDV---------NDNGPVP-------SPRVDQNPEPQVLTISDADIPPNTYPYKVSLSHGSDLTWKAELDSKGTSM--LLSPTQQLKKGDYSVNATVCSCEGKAIKCQ--------------------------------------- |
7 | 2v5tA | 0.23 | 0.08 | 2.43 | 1.58 | FFAS-3D | | LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYTTISD------NRFAML-ANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 1e07A | 0.12 | 0.12 | 4.08 | 1.36 | SPARKS-K | | -KLTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGQATPGPAYSGIYPNASLLIQNIIQNDTGFYTLHVIKSDLVNEEAGQFRVYPELPSISSNNSKPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHA---------------QYSWFVNGTFQQSTQELFIPNITVNNSGSYTNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEI-----QNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDV--GPYECGIQNELSVDHSDPVILNVLYGP---DDPTISPSYTYYRPVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNANNSASGHSRTTVKTISISSNNSKPVEDKDAVAFTCEPEAQNTGQSLPVSPRLQLSNGNRTLTLFNVTRNDSVSANRSDPVTL |
9 | 3kldA | 0.31 | 0.10 | 3.16 | 2.33 | CNFpred | | KIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIA----RKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE--QGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 7cunB | 0.07 | 0.05 | 2.07 | 0.83 | DEthreader | | --CLASLSDP--------LRLLLLVPQSQSW-Y-VLLPSLLPPDFNEVCGQDEESLGGRRTALLCKMRVVEECHLP--------LGVATLTKACEGSQQRKRE----------SSVLWMRRLTSLRLCATPAGRFSLFCMLAF-----LVCSTLGTLSANITG-----------------FL-IH--Y-YRQLCETSTPLHPQLL-------------------------PLIDVYIVYIYSSSLMDQETSLNMPRR---TQNLMIDPLVLCDQRVHTLLYLLASK--L----------------TREELKNAL--L-----------AAQDS---------AAVQILLEICLICCLLHQ-MYIADPNIAVHGYPCELLPLTVAG-IP-S-MHICLDFIPELILQIFQLLSHL-C--I-QYA---LPKSLSVARLAVNVMGTLLTFT--L--FC-AFPPLYEDIMSLLIQIGQVCASDV-TQTRDSMDPDVQLCHCIERTV--------IEIINMS- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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