>Q6UXB2 (119 residues) MKVLISSLLLLLPLMLMSMVSSSLNPGVARGHRDRGQASRRWLQEGGQECECKDWFLRAP RRKFMTVSGLPKKQCPCDHFKGNVKKTRHQRHHRKPNKHSRACQQFLKQCQLRSFALPL |
Sequence |
20 40 60 80 100 | | | | | MKVLISSLLLLLPLMLMSMVSSSLNPGVARGHRDRGQASRRWLQEGGQECECKDWFLRAPRRKFMTVSGLPKKQCPCDHFKGNVKKTRHQRHHRKPNKHSRACQQFLKQCQLRSFALPL |
Prediction | CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC |
Confidence | 92357799999999999876158993010121101003156787547512148899856546655588999899992132110345467764047764028999999999887633689 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MKVLISSLLLLLPLMLMSMVSSSLNPGVARGHRDRGQASRRWLQEGGQECECKDWFLRAPRRKFMTVSGLPKKQCPCDHFKGNVKKTRHQRHHRKPNKHSRACQQFLKQCQLRSFALPL |
Prediction | 54232333333333333321333354523544456553444114643651504511351464432424624666141641535356444564455465445304501540415525256 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC MKVLISSLLLLLPLMLMSMVSSSLNPGVARGHRDRGQASRRWLQEGGQECECKDWFLRAPRRKFMTVSGLPKKQCPCDHFKGNVKKTRHQRHHRKPNKHSRACQQFLKQCQLRSFALPL | |||||||||||||||||||
1 | 2cyxA | 0.07 | 0.07 | 2.82 | 0.43 | CEthreader | SEFMAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPAILSFPLDYKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPND | |||||||||||||
2 | 5t1aA1 | 0.09 | 0.09 | 3.49 | 0.48 | EigenThreader | -VKQIGAQLLPPLYSLVFIFGFVGNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITMCKLFTGLYHIGYFGGIFFIILLTIDRYLAIVAVRVIFTIMIVYFLFWTPYNIVILLNTF | |||||||||||||
3 | 5kk2E | 0.19 | 0.13 | 4.33 | 0.36 | FFAS-3D | VQMLLTTVGAFAAFSLMTIAVGTDY-----------------------------WL--YSRGEVMTHSGL---WRTCCNFKGLCKQIDHEDADYEADTAEYFLRAVRASSIFPILSV-- | |||||||||||||
4 | 4epoG | 0.05 | 0.05 | 2.32 | 0.77 | SPARKS-K | EELNRSKKDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNMKRKI--ECPICRKDILVLDNCINKMVNNSSEVKERRIVLIRERKAKRLF--- | |||||||||||||
5 | 4ad7A | 0.18 | 0.11 | 3.56 | 0.49 | CNFpred | TRAFVAARSFVQGLGVASDVVRKVAQV--------------------LGPECSRAVMKLV---------------YCAHCLGVPG-----------RPCPDYCRNVLKGCLANQADLDA | |||||||||||||
6 | 6ar7A | 0.07 | 0.06 | 2.42 | 0.83 | DEthreader | ----APADARRGWQESQRRWLAWRKDEAHLVVY-Y-ASADR-------LQPERAALRGARYGGAVHRV-RPCE-L-DNYYEK-LRARPA-DSRQTLVAAQREWAAFSDATPLVSEGE-- | |||||||||||||
7 | 2cyxA | 0.08 | 0.08 | 3.03 | 0.68 | MapAlign | --FMAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPRWSPVQSVEKILLSVVSMLAEPNDESG | |||||||||||||
8 | 4b7yC | 0.15 | 0.13 | 4.27 | 0.64 | MUSTER | MNP-VNATALYISASRLVLNYDPGDP-------KAFTEINRLLPYFRQSLSCGHLL-----QDPIAPTNST-KTCKGKKMMMKPSWCKDYEQFE-ENKQSILVNCYKKLCEYITQT-TL | |||||||||||||
9 | 1vt4I | 0.19 | 0.18 | 5.70 | 0.70 | HHsearch | VQKFVEEVLRILYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNVEKQPKESIPSIYLELKVKLENEYALHRSIVDHYNIPK--------TFDSDDL | |||||||||||||
10 | 1yrvA | 0.08 | 0.08 | 3.27 | 0.41 | CEthreader | RGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCLALQVMLSNPVLENPVNLEAARILVKDESLYRT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |