Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHCCCCCSSSSSSCCCCCCCCCCSSSCCCCCCCSSSSSSSSSSCCCCSSSSSSSCSCCCCCCCCCCSSSSSSSSCCCCSSSSSCSSSCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCSSSSSCCCCSSSSSSSSSSCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCHSHHHHHHHHHHHHHCC MKGILVAGITAVLVAAVESLSCVQCNSWEKSCVNSIASECPSHANTSCISSSASSSLETPVRLYQNMFCSAENCSEETHITAFTVHVSAEEHFHFVSQCCQGKECSNTSDALDPPLKNVSSNAECPACYESNGTSCHGKPWKCYEEEQCVFLVAELKNDIESKSLVLKGCSNVSNATCQFLSGENKTLGGVIFRKFECANVNSLTPTSAPTTSHNVGSKASLYLLALASLLLRGLLP |
1 | 5ganA | 0.08 | 0.06 | 2.46 | 0.83 | DEthreader | | WGILTLFMFEVYLKVAATLLDILV------------K--------GETIQNKLGLN----SKMPTRFPSITIYRVI--SPNFTLSPNTGIFLHGK-----------------IPTLKILIFRLWQKHEVCSVTKETVHPRKSY-------DITMWEVGLITNKMWFDVQLRYDLYNMY-DA----Y-GNWFLKLIMIMNPAVKM---SSKNEW-KIGHVGSVAASEVATHSKFRLTD |
2 | 6iomA | 0.16 | 0.12 | 3.95 | 2.17 | SPARKS-K | | -------------------LECYSCVQADDGCSPNKTVKCAPG-VDVCTEAVGAVETIHGQFSLAVRGCGSGLPGKNDRGLDLH-----GLLAFIQLQQCAQDRCNAKL---NLTSAYPPNGVECYSCVGLSREACQGPVVSCYNAKGCFDGNVTLTAANVTVSLPVRGCVQD--EFC---TRDGVTGPGF-TLSGSCCQGSRCNSDLRNKTYF----------------------- |
3 | 6iomA | 0.15 | 0.11 | 3.69 | 1.18 | MapAlign | | -------------------LECYSCVQKADDGCSMKTVKCA-PGVDVCTEAVGAVETIHGQFSLAVRGCGSG----LPGKNDRGLDL-HGLLAFIQLQQCAQDRCNAK---LNLTSAYPPNGVECYSCVGLSREACSPPVVSCYVYKGCFDGNVTLTAANVTVSLPVRGCVQDEF--C---TRDGVTGPGFTL-SGSCCQGSRCNS------------------------------- |
4 | 6iomA | 0.16 | 0.12 | 3.95 | 1.02 | CEthreader | | -------------------LECYSCVQKADSPNKMKTVKCAPG-VDVCTEAVGAVETIHGQFSLAVRGCGSGLPG-----KNDRGLDLHGLLAFIQLQQCAQDRCN---AKLNLTSAYPPNGVECYSCVGLSREACQGTVVSCYNYKGCFDGNVTLTAANVTVSLPVRGCVQDEFCTRDGVTGPG------FTLSGSCCQGSRCNSDLRNKTYF----------------------- |
5 | 6iomA | 0.15 | 0.11 | 3.84 | 1.41 | MUSTER | | -------------------LECYSCVQKADGCSPNKTVKCAPG-VDVCTEAVGAVETIHGQFSLAVRGCG-----SGLPGKNDRGLDLHGLLAFIQLQQCAQDRCNAKLN---LTSAYPPNGVECYSCVGLSREACQGPVVSCYNAKGCFDGNVTLTAANVTVSLPVRGCVQDEFC-----TRDGVTGPGFTLSGSCCQGSRCNSDLRNKTYF------------------------ |
6 | 3bt1U | 0.16 | 0.12 | 4.09 | 3.09 | HHsearch | | NQGNSG-----VTYSRSRYLECISCGSSDMSCERHQSLQCRSP-EEQCLDVVTHWIQEGPKDDRHLRGCGYLPGCPG----SNG--FHNN-DTFHFLKCCNTTKCNEGPI--LELENLPQNGRQCYSCKGNSTHGCSSELIDCRGPMQCLVATGTHEPKN--QSYMVRGCA--TASMCQHAHL--GDAFSMNHIDVSCCTKSGCNHPD----------------------------- |
7 | 7bprA | 0.16 | 0.12 | 3.91 | 1.13 | FFAS-3D | | -------------------LYCQADPANMFNWTTEEVETCDKGA--LCQETILIIKAGTETAILATKGCIPE---GEEAITIVQHSSPPGLIVTSYSNYCEDSFCNDKDSLSQFWEFSESTTLHCPTCVALGTCFSAPSLPCPNGTTRCYQGKLEITGGGIESSVEVKGCTAMIGCR---LMSGILAVGPMFVRE-AC--------------------------------------- |
8 | 6iomA | 0.11 | 0.08 | 3.01 | 0.78 | EigenThreader | | -------------------LECYSCVDDGCSPNKMKTVKCAPGVDVCTEAVGAVETIH--GQFSLAVRGSGL----PGKNDRGLDLH---GLLAFIQLQQCQDRCNAKLNL--TSAYPPNGVECYSCVGLSACQGTSPPVVSCYYKGCFDGNVTLTAANVT-VSLPVRGCDEFCT--------RDGVTGPGFTLSGSCCQSRCNSDLRNKTYF------------------------ |
9 | 3bt1U | 0.16 | 0.11 | 3.81 | 2.86 | CNFpred | | ------------------YLECISCGSSDMSCERHQSLQCRSP-EEQCLDVVTHWIQGRPKDDRHLRGCGYLPGCP----GSNGFHNN---DTFHFLKCCNTTKCNEGPI--LELENLPQNGRQCYSCKGNSTHGCSTFLIDCRGMNQCLVATGTHEPK--NQSYMVRGCATA--SMCQHAHL--GDAFSMNHIDVSCCTKSGCNHPD----------------------------- |
10 | 1f13A | 0.06 | 0.05 | 2.01 | 0.67 | DEthreader | | -------------------------NAAEDDLPTVELQG------LFRVEYVI--------GRYPTYIPVPVQKWGAKSIQSSPK------VGKFRMYVAVWTGVLRTSRNETDTYIL-VLNDIGVIFYGEVNDIKTRSWSYGQFRPARIVTNFSALQMDISVWNYHCWNE-AWMWQAPASVQAIAPFVFAEVNGIVTKQIGGDGMM-----DFEVLITFTAVTAR-INETR----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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