Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCSSSSSSCCCCCCCCCCCSSCCCCCCCCCSSCCCCCCCCCCSSSSSCCCCCCCCCSSSSSSSSSCCCSSSSCCCCCCCCCCCCSSSHHHHCCCCCCCCCSSSSSSSCCCSSSSSSCCSSSSCCCCCCCSSSSSSSSCCCCSSSSSSCCCCCCCCCCCCCCCSSSSSSSSSSSSCCCCCCCCCCCCCSSCCSSSSSCCCSSSCCSSSSSSSCCCCCCCCCHHHHHCCCCCCCSSSCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCSSCCCC MARFPKADLAAAGVMLLCHFFTDQFQFADGKPGDQILDWQYGVTQAFPHTEEEVEVDSHAYSHRWKRNLDFLKAVDTNRASVGQDSPEPRSFTDLLLDDGQDNNTQIEEDTDHNYYISRIYGPSDSASRDLWVNIDQMEKDKVKIHGILSNTHRQAARVNLSFDFPFYGHFLREITVATGGFIYTGEVVHRMLTATQYIAPLMANFDPSVSRNSTVRYFDNGTALVVQWDHVHLQDNYNLGSFTFQATLLMDGRIIFGYKEIPVLVTQISSTNHPVKVGLSDAFVVVHRIQQIPNVRRRTIYEYHRVELQMSKITNISAVEMTPLPTCLQFNRCGPCVSSQIGFNCSWCSKLQRCSSGFDRHRQDWVDSGCPEESKEKMCENTEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDTKIALHLKDNGASTDDSAAEKKGGTLHAGLIIGILILVLIVATAILVTVYMYHHPTSAASIFFIERRPSRWPAMKFRRGSGHPAYAEVEPVGEKEGFIVSEQC |
1 | 1vt4I3 | 0.05 | 0.05 | 2.20 | 1.32 | MapAlign | | LKNIEHPERMTLFDFRFLEQKIRASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------- |
2 | 3nvnB2 | 0.28 | 0.03 | 0.87 | 1.30 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANCNKHKSCSECLTAT-DPHCGWCHSLQRCTFQGDENLENWLDISSGA----KKCPGAP------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 3nvnB | 0.05 | 0.04 | 2.01 | 0.75 | CEthreader | | -------------------------------------------------------------------------------------EPVWRSEQAIGAIAASQEDGVFVASGSCLDQLDYSLEHSLSRLYRDQAGNCTEPVSLAPPARPRPGSSFSKLLLPYREGAAGLGGLLLTGWTFDRGACEVRP-LGNLSRNSLRNGTEVVSCHPQGSTAGVVYRAGRNNRWYLAVAATYVLPEPETADTAIALKDTEGRSLATQELGRLKLCEGAGSLHFVDAFLWNGSIYFPYYPYNYTSGAATGWPSMARIAQSTEVLFQGQASLDCGHGHPDGRRLLLSSSLVEALDVWAGVFSAAAGEGQERRSPTTTALCLFRMSEIQARAKRVSWDFKTAESHCKEGDQPERVQPIASSTLIHSDLTSVYGTVVMNRTVLFLGTGDGQLLKVILGENLTSNCPEVIYEIKEETPVFYKLVPDPVKNIYIYLTAGKEVRRIRVANCNKHKSCSECLTATDPHCGWCHSLQRCTFQGDCVH |
4 | 1yr2A | 0.04 | 0.03 | 1.62 | 0.77 | EigenThreader | | DVRTDAKVAAWVQAQSAYTAAYLK--QAPVGTKDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKW--VKFSGLAWLAEPLNYNGTPQSADPELPKSDGRWVVITSSEGTDVTNALIPDLK----------------AQWDFVDG-VGDQLWFVSG-----DGAPL---KKIVRV---DL-------------------------SGSTPRFDTPESKDNL--ESVGIAG------NRLFASYIHDA---KSQVLAFDL---------DGKSLPGIGSASGLSG---RPGDRHAYLSFSSFPATV-LALDPATAKTTPWEPYGGFNVALTLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGNGGLLIGAVTNQRPDLFA------------AASPAVG----VMDMLRFDQFTAGRYWVDDYGYPEKEADWRVLRRYSPYHN---------------------------VRSGV-------DYPDTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIEP |
5 | 6fkmA | 0.16 | 0.07 | 2.40 | 0.45 | FFAS-3D | | ---------------------------------------------------------------------------KTKMFQIASSAVTTGTRTFINSYARETYFVNYVYGFSSEYFLTTQLKHSHHSSPKEYIT---------KLVRICQEDSNYYSYTEIPVQGGTKFNLVQAGFLGKPS---------SDLAQS-----------LGISIQDDVLF----AVFSKGEGNTPTN----------NSAL-----CIYSLKSIRRKFMQGLDVNSPLGVGTSDGFLKK-----VVIESSSIANEYASFAVDLGSVMSKTKVSKVKVFDCSDYKTCGDCLGARDPY-CGWCSLENKCSQDDANDPLYWVTGKC-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 7aavA | 0.12 | 0.10 | 3.58 | 0.91 | SPARKS-K | | MYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEAAHP--IRLFCRYIDRIHIFFRFT---ADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPR-------DARMRLMK------------HDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSK--------DNPNL-------LFNM------CG---FECRILPKCRTSYEEFT---------------HKDGV-----------WNLQNEVTK-ERTAQCFLRVDDESMQRNRVRQILMASTTFTKKWNTALFREAVVNTNKIQTRIKIGTPKELGGLGMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWELKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLGWRVRTDFKQYQVL------------------KQNPFWWTHQRDGKLWNLNNYTDMIQAGGVEGILEHTLF |
7 | 4hhqA | 0.10 | 0.03 | 1.25 | 0.60 | CNFpred | | -------------------------------------------------------------------------------------------------------------------PQGISTFIDDDNTVYLLVVNQPGSSSTVEVFKFQ---EEKSLLHLKTIRHKL-LPSVNDIVAVGPEHFYATNDH-PYLKSWEMH----------GLAWSFVTYYSP-NDVRVVAEGFD---------FANGINISPDGKYVYIAELLAHKIHVYEKANWTLT-TLVDNISVDP--------VTGDLWVGCHPNGMR-NPPGSEVLRIQDI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 2vdcA | 0.05 | 0.04 | 1.64 | 0.67 | DEthreader | | AIDGKPRRSVVEKGIEALKAVWHRGAVDADGK-DILEQLTLAIYHQRYSTNTFP-------GEINTVKGVDGSLDTVFEVMVRAGR--VMLVMEPWDGAALAGMDLRNFSQV------DSLRER-RV--MSLKTRLGNRLLQLFRMRDY-----AEIDA------------IRTVILTDEMAIPAILATGA-TAEGLDTHY-F---------------LIGVGATTVNAYQEIAHRGGSMPEKAKKIDLLKIMSKI---------------------------KVLEQHAT-AYNEEVALPVGGFYR-------------------HGWPMQLRDL--TP-MAQGAVSRSIGISGNKFAGLP--MG-SE----DIAMLGAFGITASIAMGCFVGTP-----------------------------------------------------PLFEEGEVRKFGMLAVQGGAGKNATVMGAFAMTGGMAYYSQLKHLIEE-VTETQSRFAAEILNDWARE------------ |
9 | 3nvnB | 0.04 | 0.03 | 1.35 | 1.16 | MapAlign | | ----------------------------------------AIGAIAASQEDGVFVASGSCLD---------------------------------------------------------QLDYSLEHSLSRLYRDQAGNCTEPVSLARPRPGSSFSKLLLPYREGAAGLGGLLLTGWTFRGACEVRPLGNLSRNSLRNGTEVVQGSTAGAGSLHFVDAFLWNGSIYFPY-YPYNYTSGAATGWPSMARIAQEVLFQGQASLDC-----------GHGHPDGRRLLLSSSLVEALDVWAGVFSAATALCLFRMSEIQARAKRVASSTLIHSDLTSVYGTVVMNRTVLFLGTGDGQLLKVILGENLTSNCPEV--------------------------------------------------------------------------------IYEIKEETPVFYKLVPDPVKNIYIYLTAGKEVRRICSECLTATDPHCGWCHSLQRCTFQGDCVHSENLENWLD----- |
10 | 5hrmA | 0.11 | 0.09 | 3.26 | 0.68 | MUSTER | | QVVIGPGDRPETG-------LQGQTTIEDVVSGRSKLPYGVRLVGRTDIWNRGGNLQLSWVDQFKQAGPITANSRSALFLREPADPRAPKPVRLLRDRGSIDAVETMHAIAARKVLVAGAYSGGIAG---------RGEEDAAWLSIYASNC-LNPKLQS-EFKWPANIH---MVTISPNGRVYGTEVVPGLGSGKGGLH-----LDISDMKR---------PRYLGRFG-VTRPNGLTAGFTPHEVSISHDERRIYAAVLASVPVGASILASDGDVPVENGSVYILDNSDIVDGRSQPKMRLVGEAKQGG----FHSVVPASI---------------NGVPH----AAELGACPGTWDEKNGEFKLQMNIKENCDAIRFTPRKEDPYASFIPIPDITARLGAVGSHFNDVDDARNTRLG-LRDPTKPKPGANPDTPLSGNGLNWTGLNDQVTDGCMSHVRYV----------IWF----CVTTGFHVVELNPDLRARLGFPT------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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