Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SWTSLQTIAGVLSGFLIGSVSLVIYYSLLHPKSTDIWQGCLRKSCGIAGGDKTERRDSPRATDLAGKRTESSGSCQGASYEPTILGKPPTPEQVPPEAGLGTQVAVEDSFLSHHHWLWVKLALKTGNVSKINAAFGDNSPAYCPPAWGLSQQDYLQRKALSAQQELPSSSRDPSTLENSSAFEGVPKAEADPLETSSYVSFASDQQDEAPTQNPAATQGEGTPKEGADAVSGTQGKGTGGQQRGGEGQQSSTLYFSATAEVATSSQQEGSPATLQTAHSGRRLGKSSPAQPASPHPVGLAPFPDTMADISPILGTGPCRGFCPSAGFPGRTLSISELEEPLEPKRELSHHAAVGVWVSLPQLRTAHEPCLTSTPKSESIQTDCSCREQMKQEPSFFI |
1 | 5jcss | 0.08 | 0.07 | 2.90 | 1.09 | SPARKS-K | | SVRDLIKLCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALEPIIQAIGESLDIASSRISLLTQHVPTLENLDDSIKILKEKLNIQKKSMNSTLFAFTNH----------SLRLMEQISVCIQMTEPVLLVGETGTGKTTVVQQLAKMLAKKLTVINVSQQTE-TGDLLGGYKPKTVAVPIQENFETLFNATFSLKNEKFHKMLHRCFNKNQWKNVVKLSILKITNTENENENAKK--------KKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVEGSL--------VKTIRAGEWLDEVNLASDLLTEPDSRSILLSEKGDAEPIKHPDFRIFACMNPATDSRFTEVHSPERDITDLLIGKYSVSDEWVGN |
2 | 2pffB | 0.10 | 0.10 | 3.56 | 1.03 | MapAlign | | LLSIPISCPLIGVIQLAHYVVTAKLLLKGATGHSQGLVTAV------AIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNHLPAGKQVSLVNGAKNLVVSGPPQSLYGLNLTLRVRVIVAGTLDINPDDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 2pffB | 0.19 | 0.18 | 5.67 | 1.09 | HHsearch | | AADDEPTTPAELVGKFLGYVSSLVEPS----KVGQFDQVL-NLCLTEFENCYLEGN-DIHALAAK--LLQENDTTLVKTKELPFDKKSNSALFRNAVAIFGGQGNTDDYFEQTYHVLVGDLIKFAETLELIRTTLDAEKVFLNILEWLENPSNTPDKDYLLSIPSCPLLGFTPGELRSYKGATGHSQGAVAIAETDSWESFFVSVREAYPNTSLPPSILEDSLEN-------------------NEGVPSPMLSISNLTQEQVQDYVSHLPAGKQVEISLVNLVVSGPPQSLYGTLR-KAKAPSG-LDQSRIPFSE--RKLKFSNRFPVASPFHS---HLLVPASDLNNFNAKDIQIPVYDTFDGSDLRVLSGSISE-RIVDCIIRLPVKWETTTQF |
4 | 4xnnA | 0.07 | 0.07 | 2.68 | 0.57 | CEthreader | | ----------------------------------NVGTQAAEEPLNLPISVCTAPGNCQTEADAVVLDSNWRWAHTTTGYTNCYTGNLWDTTLCPTPETCTTNCAIDGVPLADWSGTYGGSVTGNKFNLKFVTVGPYSTNIGARTFLLDSTKTRYRMFQLLNREFTYDVDVSSLDCGLNGALYFVSMDADGGAAKYPTNKGGAKYGTGYCDAQCPHDVKWINGLANSKDWTPIPGDANSGKGYYGNCCAELDIWEANKQSQAFTTHPCTPNDQTRCEGVVCGDNDSGDRYNGMCDKDGCDFASYRMNDHTFYGPGSTFKLDSTKPFTVVSQFITTDGTDNGDFKEFRRFYVQNGVRIENSKVNFPGITAYDSITDEMCAATKGLFGDLDDHKNKGGM |
5 | 1jb0A | 0.06 | 0.06 | 2.70 | 0.58 | EigenThreader | | NVESMLNHHLAGLLGLGSLAWAGHQIHVIPLPHEFILNMAELYPKVDWGFFSPFFTFNWAAYSDFLTHMYRTNWGIGHSKGPFTGAGHKGLYEVLTTSWHAQLAINLAMMGSLSIIVAQHMYAMYPTQLSLFTHHMWIGGFLVVGGAAHGAIFMVRDYDPAMNQNNVLDRVLRHRDAIISHLNWVCIFLGFHSFGLYVHNDTRPQDMFSDTGIQLQPVFAQWVQNLHTLAPGGTAPNAAATASVAFGGDVVAVGAMMPIVLGFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNCISVVIFHFSWKMQSDVWTGGNFAQSAITINGWLRDFLWAQASQVIGSYGSALSAYGLLFLGAHFIWAFSLMFLFSRAVGVAHYLLGGI |
6 | 7d43P | 0.11 | 0.09 | 3.38 | 0.43 | FFAS-3D | | -----------------------------HGKSTVV--KAISGVHTVRFKNELERNITIKLGYANAKIYKLDDPSCPRPECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSGHDILM---ATMLNG------AAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKESQAKEQYEQILAFVQGTVAEGAPIIPISAQVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLG--------------VRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGLTNPVCTEVGEKIALSRRVEKHWRLI- |
7 | 6f1tg | 0.06 | 0.06 | 2.41 | 1.05 | SPARKS-K | | EEKQQILHSEEFLSFFDHSTRIVERRQFFDERWS------KHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGV-ALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNL-------------------VVGGTYSGQIVLWDNRSNKRTPVQRTPLPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSM-ELVHKQSKAVAVTSMSFPVGDVNSEEGSVYTACRHGSKAGISEMEGHQGPITGIHCHAA----VGAVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNAGYV--YDVMWSPFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGD---SEGQIVIYDVGEQIAVPRNDEWARFGRTLAEIN |
8 | 5xtcr | 0.14 | 0.03 | 1.11 | 0.65 | CNFpred | | --EAPIAGSMVLAAVLLKLGGYGMMRLTLNPLTKHMAYPFLVLSLWGMIMTSSIC-------------------------RQTDLKSL-------------------YSSISHMALVVTAILIQTSFTGAVILMIA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 5cskA | 0.06 | 0.04 | 1.76 | 0.67 | DEthreader | | --AEKPDPTLACIAIGGKGSPVIEYKFKSLVSEFHFLEEYYEVEKLFNGNVREENIILKLEVTS----FSTPLQH--IVELE-S----K--ATAKVA--LQAREI----------------------------------------------TDNRSDILDNLETLNHI----FGGFLERFGKRLLRGYTTFPVVANPQEDEDGLGVCLRGSGLIAG--------------------------ATSRAYHDIF--------------LVRLGQRAIQ-VEGQPSNLQGTSLTAGEKIVEWMSYVPRNMPV-W---PYDVRW-IEG-----GFEYGLFDKGS-FE-TLSGWAKVVVGRARLGIPLP-KQPIMEMYADVNSS----------TEARFFRE |
10 | 2ebsB | 0.07 | 0.07 | 2.83 | 0.95 | MapAlign | | ---DLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVYKDGTPVPWLDFNNGPQWGGYGAPHGTPGLTKFGWWMSAVLIDPFNPEHLMYGTGATIWATDTLSRVEKDWAPSWYLSPKSGAALLSGIGNISGMKHDDLTKPQKMFGAPQFSNLDSIDAAGNFPNVVVRAGSSGHEYDSACARGAYATDGGDAWTIFPTCGMNASHYQGSTIAVDASGSQIVWSANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAKGAGLVTGTSLMPAVNPWVAGDVWVPTLVSVGAPKSSAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEADPKVYGRVYLGTNGR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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