>Q6UWN8 (80 residues) MKLSGMFLLLSLALFCFLTGVFSQGGQVDCGEFQDPKVYCTRESNPHCGSDGQTYGNKCA FCKAIVKSGGKISLKHPGKC |
Sequence |
20 40 60 80 | | | | MKLSGMFLLLSLALFCFLTGVFSQGGQVDCGEFQDPKVYCTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC |
Prediction | CCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCSCCCHCHHHHHHHHCCCCSSSSSCCCC |
Confidence | 94389999999999972301213567666422478899999987871289987438822999999741993798863789 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 | | | | MKLSGMFLLLSLALFCFLTGVFSQGGQVDCGEFQDPKVYCTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC |
Prediction | 54321221231112113134344564524155277453313442412104445326140302332155755041345378 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCSCCCHCHHHHHHHHCCCCSSSSSCCCC MKLSGMFLLLSLALFCFLTGVFSQGGQVDCGEFQDPKVYCTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC | |||||||||||||||||||
1 | 4nx9A | 0.07 | 0.06 | 2.61 | 1.00 | DEthreader | GLNVATKNANDGISLAQTAEGALQQSNIQRRDLLQSLNEVQKEDSELNGTANDTVAK--ID-ISKGAQSVLVEAKQI--- | |||||||||||||
2 | 2leoA | 0.33 | 0.26 | 7.88 | 3.26 | SPARKS-K | -----------------SEAASLSPKKVDCSKYPVVAIPCPITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC | |||||||||||||
3 | 2leoA | 0.33 | 0.26 | 7.88 | 0.84 | MapAlign | -----------------SEAASLSPKKVDCSIYKVVAIPCPITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC | |||||||||||||
4 | 2leoA | 0.33 | 0.26 | 7.88 | 0.92 | CEthreader | -----------------SEAASLSPKKVDCSIYKVVAIPCPITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC | |||||||||||||
5 | 2n52A | 0.98 | 0.70 | 19.61 | 2.44 | MUSTER | -----------------------QGGQVDCGEFQDTKVYCTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC | |||||||||||||
6 | 2n52A | 0.98 | 0.70 | 19.61 | 1.76 | HHsearch | -----------------------QGGQVDCGEFQDTKVYCTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC | |||||||||||||
7 | 2n52A | 0.98 | 0.70 | 19.61 | 0.88 | FFAS-3D | -----------------------QGGQVDCGEFQDTKVYCTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC | |||||||||||||
8 | 3b4vD | 0.17 | 0.17 | 5.72 | 0.85 | EigenThreader | DECELRAARCRDLSVMYRGRCRKSCEHVVCPCRAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSC | |||||||||||||
9 | 2n52A | 0.98 | 0.70 | 19.61 | 1.14 | CNFpred | -----------------------QGGQVDCGEFQDTKVYCTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC | |||||||||||||
10 | 4nx9A1 | 0.05 | 0.05 | 2.26 | 1.00 | DEthreader | GLNVATKNANDGISLAQTAEGALQQSTIQRRDSLQSLNEVLKEDSESLNGN-DTVA---KIDISKGAQSVLVEAKQI--- | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |