Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSSSSSSSCCCCCCCCCCCCCCCCCSSSSSSSSSSCCCCCCCCCCHHHHHHHSSSSSCCCCCCCCCCSSSSCCCCCCCCCCCCSSCCCCCCCSSSSSSSSSCCCCCCSSCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCSSSCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCSSSSSSSCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAAPPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVRNT |
1 | 6r9tA | 0.05 | 0.03 | 1.28 | 0.67 | DEthreader | | TILTTEFREAAGLRATNAAAQNAIK-K--------KLVQRLEHA-----------AKQAAAS-------------------------AASQSFLQPGKMVAAASVPTIQDQA-----------------------------------MEK-----------------------------------------------------------------------------------------------------------------------T--DLGNSTK-AVSSAIAQLL-E----GNENYAG-A-DVLDKASSL-EEKESQQRLAQVAKATQNDLVGASLSPPSTGTFQEAQSRLEAGLAALVSRLLENPVQPYLVGVSDQQGHKVSQMAQYFEPLTLAAVGAASKTLSHPQQ------AASAAGEELGPLANLCLVKAGALQSPSDAK--KLEQLKPAKTNNLCESAQVAASTAQLVACKQ |
2 | 7c4jA | 0.24 | 0.17 | 5.23 | 2.40 | SPARKS-K | | ---------------------------------------------------------------------------------------------------HSHPSDMVIPDHLAELIPELYSFQQLVDSEKRLDHFIHLRNLHMKRMVAQNFPNVKFLRIFISNVSENQPWN--------ATWTMRIEGRLLDNVQANDEKFSSFIESIVVDFKLES-------VKWQYF------DGLDIKRVGSENVECTISILRKSSPEFMSYSPQLTAIIGLKSGTSHDAIFSIYKYIHLNELLAFENN------RNNHNSNKLT----DLLSLINSTHLLPLQPIEIDYTVRVDKASTYGELVLDIEVPDTQRESQIGAAELNENAIKPKIALQDKEITSVLSNLHESNKRYRFFKKISEDPVKALNECIASTSNALKVLSGDGYNEDMVRRANFYKEAMLRENIEVILSNGRM--------------- |
3 | 2pffB | 0.07 | 0.07 | 2.74 | 1.26 | MapAlign | | MDAYSTRPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYISCPLIGVIQLAHYVVTAKLLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVIGLL--SATQFTQPALTLMEKAAFEDLKSKGLIGEYAALASLADVMSIESLVEVVFYRGMTMQYVAAGDLRALDTSLSL |
4 | 7c4jA | 0.22 | 0.15 | 4.78 | 1.97 | MapAlign | | --------------------------------------------------------------------------------------------------------DMVIPDHLAELIPELYSFQQLVDSEKRLDHFIHLRNLHMKRMVAQWFPNVKFLRIFISNVSENQ--------PWNATWTMRIEGRLLQANDPAREKFSSFIESIVVDFK-------LESVKWQY------FDGLDIKRVGSENVECTISILRKSEEPFMSYSPQLTAIIGLKSGTSHDAIFSIYKYIHLNELL-----AFEN-N-RNNHNS---NKLTDLLSLINSTHLLPLQPIEIDYTVRVDKASTYGELVLDIEVPDANQIGAAELNENALEQIKPKIALQDKEITSVLSNLHESNKRYRFFKKISEDPVKALNECIASTSNALKVLSGDE-----GYNEDMVRRANFYKENEAMLRENIEVILSNGRM------- |
5 | 5o09C | 0.06 | 0.06 | 2.67 | 1.18 | MapAlign | | LKISAENGLEESDKVATIKNNLAMIFKQLRKFERAEGYYCEALETFQRLDGEQSARVASVYNNLGVLYYSHMDVDRAQVMHERALAIRQNLHEGQMDPADLSQTFINLGAVYKADFQKAEACVDRAKRIQIASASRSVEEARRLAYHRAQELRKQDPDLTGIYSLLAHLYDRWGRMDKAAEFYLALISNGLEESDKVATIKNSARVASYNLGVYSHMDVDRAMHRAIRQNLPADLSQTFNKAESLYREALFRAQELRKQDPDTGYSLLAHLYYLALISLSDKVATIKNNLAMIEALFDGEQSAVAVY-NNLGVLQVMHRAILSQTFINLGAVYKAAGDFQKAEACVDRAKRIRAAMGDTALERQIASASRSVEEARRRVGALVEQISVLADLRQKDFRKAESLYREALFRAQELQDPDLLTGIYSLLAHLYDRWGRMDKAAEFYLALKISAENGLEDKVATIKNNLAMIFAEGYYCEALETFQ |
6 | 7c4jA | 0.25 | 0.17 | 5.34 | 1.57 | CEthreader | | ---------------------------------------------------------------------------------------------------HSHPSDMVIPDHLAELIPELYSFQQLVDSEKRLDHFIHLRNLHMKRMVAQNFPNVKFLRIFISNVSENQPW--------NATWTMRIEGRLLDNVQAAREKFSSFIESIVVDFKL-------ESVKWQY------FDGLDIKRVGSENVECTISILRKSSPPFMSYSPQLTAIIGLKSGTSHDAIFSIYKYIHLNELLAFENNRNNHNSNKL----------TDLLSLINSTHLLPLQPIEIDYTVRVDKASTYGELVLDIEVPDVNALKFNNTQRESQEQIKPKIALQDKEITSVLSNLHESNKRYRFFKKISEDPVKALNECIASTSNALKVLSGDEGNEDMVRRANFYKEAMLRENIEVILSNGRM--------------- |
7 | 1vt4I3 | 0.03 | 0.03 | 1.76 | 1.13 | MapAlign | | -----------------------LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNPKYERLVNAILDFLPDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
8 | 6lthP | 0.78 | 0.39 | 10.95 | 1.47 | MUSTER | | ---------------------------------------------------------------------------------------------------KKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIK----------------------------------------------------------------------------------------------------------QPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPET-----------------------------LKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQE---------- |
9 | 7c4jA | 0.25 | 0.17 | 5.39 | 7.37 | HHsearch | | ---------------------------------------------------------------------------------------------------HSHPSDMVIPDHLAELIPELYSFQQLVDSEKRLDHFIHLRNLHMKRMVAWLFPNVKFLRIFISNVSENQPW--------NATWTMRIEGRLLDNVQPAREKFSSFIESIVVDFKL-------ESVKWQY------FDGLDIKRVGSENVECTISILRKSSPEPMSYSPQLTAIIGLKSGTSHDAIFSIYKYIHLNELLAFENNRNNH-----------NSNKLTDLLSLINTHLLPLQPIEIDYTVRVDKASTYGELVLDIEVPDVNALKQIGAAELNLEQIKPKIALQDKEITSVLSNLHESNKRYRFFKKISEDPVKALNECIASTSNALKVLSGDEGNEDMVRRANFYKEAMLRENIEVILSNGRM--------------- |
10 | 7c4jA | 0.25 | 0.17 | 5.33 | 3.22 | FFAS-3D | | ---------------------------------------------------------------------------------------------------HSHPSDMVIPDHLAELIPELYSFQQLVDSEKRLDHFIHLRNLHMKRMVAQNFPNVKFLRIFISNVSENQPWN--------ATWTMRIEGRLLDNNDPAREKFSSFIESIVVDFK-------LESVKW------QYFDGLDIKRVGSENVECTISILRKSSPEEMSYSPQLTAIIGLKSGTSHDAIFSIYKYIHLNELLAFENNRNNHNSNKLTDLL----------SLINSTHLLPLQPIEIDYTVRVDKASTYGELVLDIEVPDVNALKFNNENARELEQIKPKIALQDKEITSVLSNLHESNKRYRFFKKISEDPVKALNECIASTSNALKVLSGDEGNEDMVRRANFYNEAMLRENIEVILSN------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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