>Q6SJ96 (375 residues) MASAPWPERVPRLLAPRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPL FSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHE TEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSL ASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMR IREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCD VRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYE AFENIYPILKGFKKA |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MASAPWPERVPRLLAPRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKA |
Prediction | CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSCCCCCCHHHHHHHCCCCSSCCCCCCSSSSSSCCCCSSSSSSCCCSSSSSCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSSSSSSCCCCSCHHHHHHHHCCCCCCCCCCCCSSSSSSCCCCSSSSSSCCCSSSSSCCCCHHHHHHHHHHHHHHHHHHHCC |
Confidence | 998878877623332216799999876788877866420234442113677788988777888888877888889853234777665557887775544568730011355666555544334544567544578886433455556666678876668765556677777887655554456777888765456764158999999998275016999997679845566557669999549936999966984999657999999999999999999919975565327998999986698616999999701234017766873799957995799995698399971699999999999999999996159 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MASAPWPERVPRLLAPRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKA |
Prediction | 756274263013101431463333454143442567442034105411356533444341232122241433443324423544544555546345342422355155645556445454455545444454535444555453435444354543534454364344444435555443442443444542653460202010000003040402043005405404032751100001034130001012301000000323610240044005104616050514613130000002041403032004403640423143100000205524000000120200000033361034004201410351378 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSCCCCCCHHHHHHHCCCCSSCCCCCCSSSSSSCCCCSSSSSSCCCSSSSSCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSSSSSSCCCCSCHHHHHHHHCCCCCCCCCCCCSSSSSSCCCCSSSSSSCCCSSSSSCCCCHHHHHHHHHHHHHHHHHHHCC MASAPWPERVPRLLAPRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKA | |||||||||||||||||||
1 | 5xjcA | 0.07 | 0.05 | 1.85 | 0.67 | DEthreader | -----------GSMWIMAQLAL-WVVGLQVCRQGYNMLNLLIRKNLLARQFEGRHSKG-----------------------VAKTVTKQR----TVDKTVCKKNLGRTRYKAEQERQHNY-------HLLQR----VGIEFMDLLVPEKMYEKIDLTLLNRT-SYGLPRS-VTTVQNSMCGESRNRQILMSGSIGQNRTLLLFLWIHIDLVFELLEIETV----------Q--KETIHKSYKMNSSCADILLFYWIDIQLRWGDHDIEYARVLIAYGNWFPGSKLIQQAMIMLLRRI-KG--------------------------------------------------------------------------- | |||||||||||||
2 | 4b0aA | 0.61 | 0.38 | 10.92 | 1.50 | MapAlign | ------------------------------------TNLANEDEAYEAIFGGEFG--------------------------------------------------------------SLEIGSY-----------------------------------------IGGDEARNSKDYTEHLPDAVDFEDEDELADDGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFR-- | |||||||||||||
3 | 6cnbR | 0.26 | 0.25 | 7.81 | 1.43 | EigenThreader | CHGTELSNANNDACGVVSEDNPIVSEVALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDACRMNNLRRTTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKESGIVPTLQNIVATVTLGCRLDLKTVAL--HARNAEYNPKRFAAVIMRIREPK-----TTALTGAK--SEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSC-DVKFPIRGLAFSHGTFSSYEPELFPGLIY-RMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM | |||||||||||||
4 | 4b0aA | 0.59 | 0.38 | 10.78 | 0.97 | CEthreader | ------------------------------------------------------------------------------------------------------------------------------------------KTNLANEDEAYEAIFGGEFGSLEIGSYIGGDEARNSKDYTEHLPDAVDFEDEDELADDGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM | |||||||||||||
5 | 6cnbR | 0.40 | 0.39 | 11.57 | 1.45 | MapAlign | RAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEAKLSVQKFRENDVEDGEARPPSFVKNRKKESGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLS----- | |||||||||||||
6 | 4b0aA | 0.60 | 0.38 | 10.93 | 1.81 | MUSTER | ------------------------------------------------------------------------------------------------------------------------------------KTNLANEDEAYEAIFGGEFGSLEIGSYIGGDE------ARNSKDYTEHLPDAVDFEDEDELADDGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM | |||||||||||||
7 | 4b0aA | 0.61 | 0.38 | 11.00 | 2.45 | SPARKS-K | -----------------------------------------------------------------------------------------------------------------------------------KTNLANEDEAYEAIFGGEFGSLEIGSYIGGDEARN----SKDYTEHLPDAVDFEDEDELADDGI---VPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM | |||||||||||||
8 | 4b0aA | 0.62 | 0.39 | 11.14 | 3.60 | HHsearch | ----------------------------------------------------------------------------------------------------------------KTNLNEDEAYEA--I--FGGEFGS---LEIGSY------IG-------GDEARNSKD--YT-----EHLPDAVDFEDEDELADDGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM | |||||||||||||
9 | 1vokA | 0.77 | 0.39 | 10.94 | 2.02 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKI | |||||||||||||
10 | 4b0aA | 0.78 | 0.37 | 10.56 | 3.22 | CNFpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |