Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCHHHCCHHHHHHHHHHCCCCCSSSSSSCCCCSCCCCHHHCCCCCSSSSSCCCCCCHHHHHHHHHHHCCCSSCCHHHHHHHHHHHHHHHHHCCCCCCCSSSSSCCCCHHHHHHHHHCCCCCCCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC MWSLTASEGESTTAHFFLGAGDEGLGTRGIGMRPEESDSELLEDEEDEVPPEPYLTVVILGEDVILNEPVENWPSCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLAMQYYIQRCVIAIIRHGDRTPKQKMKMEVKHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGGEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASNEGQDPQRETLAPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDPQEYGISREEKLEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLCYLRYSRGVLSPGRHVRTRLLHFSPGVKGVEEEGSAPAGCGFRPASSENEEMKTNQGSMENLCPGKASDEPDRALQT |
1 | 1vt4I | 0.10 | 0.10 | 3.55 | 1.76 | MapAlign | | ----PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA-WNAFNLSCKILLT---TRFKQVTDFLSAATTTHSLDHHSMTLPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSLHLVEKQPKESTISIPSIYLELKVLQQLKFYKPYICDNDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------- |
2 | 3t54A2 | 0.42 | 0.11 | 3.32 | 4.56 | HHsearch | | --------------QIVVGICSMAKKSKSKPMKEIL----E-----RI-SLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVIFVKNSMKYYDDCILG--NIVMRELAPQFHIPWSI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 1vt4I3 | 0.09 | 0.09 | 3.47 | 0.87 | CEthreader | | IEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 2xheA | 0.07 | 0.06 | 2.54 | 0.80 | EigenThreader | | TNSLRSVADGGDWKVLVVDKPALRMISEC------ARMSEILDLSKQRKVLPQFHGVYFIEPTEENLDYVIRDTYEAAHLFFLS-PVPDALMAKLASAKAVKYVKEINTL------FIPKEH---------RVFTLNEP---HGLVQYYGSRSS--SYNIDHLVRRLSTLCTTMN------VTPGTERMAMQLQKEIDMSVSLKSPLVHELTYSYSTVDAGGRGEDDDIWLQMRH---------LHISEVFRKVKSSFDEFCVSARRLQGLRDSQQGE----------GGAGALKQMLKDLPQHREQMQKYSLHLDMSNAINMAF---SSTIDSCTKAEQNIVTEEEQDGNKVRD------FIGEVASVVVDRRVSTEDKLRCLMLCVLAKNGTSLEMLGATVVADRRGRKPKTMK |
5 | 3t54A | 0.30 | 0.18 | 5.39 | 0.78 | FFAS-3D | | ----------------------------GICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIRREVYSILQEGILLPRYAILEVFQKP---FVEKPVSAEDHNVYIYYPTSAGGGSQSRSSVYSPESNVRKTGSY------------IYEEFMPTDGTDVKVRKSPALDGKVERDSEGKEVRYPVI------------LNAREKLIAWKVCLAF---------------KQTVCGFDSFVKNS-------MKYYDDCAKILGNIVMREL------------------------------------------------------------------------------------------------ |
6 | 4btgA | 0.12 | 0.11 | 4.02 | 0.60 | SPARKS-K | | QSTACNPEIWRKLTAYITG-SSNRAIKADAVGKVPPTAILEQLRTLAPSEHELFHHIVLSPLGFIPDAAY--VYRVGRTATYPN--FALVDCVRASDLRRMLTALSLAPALISQHLANAATTAFERSGNFDAN-AVVSSVLTILGRLWSPSTPKELRLRNTDQLRSNLALFIAYQDMVKQRGRAEVDEELSSIEAMSEVSETTSYISAISHVVVYEDWQFAKEITAFTPVKLANNSNQ------RFLDVEPGISDRMSATLANRTAVYAVSQRGTVNSNGAEMTLGFPSVV-ERDYALDRDPMVAIAALRTGASNDLKRSMFNYYAAVMHYAVAH-NPEVVVSEHQGVAAEQGSLYLVWVRTEPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLWHETEFAYEDAYSVT |
7 | 6smrA | 0.08 | 0.05 | 1.77 | 0.64 | CNFpred | | ------------------------------------------------------PKLLICGGSAYPRWDYARFR-VGALLLCDM---AHISGLVAAQEA-DVVTTTTHKSLRGPRAGMIFYRKGPK-QPEGAVYDFE-DKINFAVFPA------LQGGPHNHQIGALAVALKQANTP-------GFKVYAKQVKANAVALGNYLMSK--GYQIVTNGT-------------------ENHLVLWDLRP---GLTGNKVEKLCDLCSITLNKNAVFGDSALAPGGVRIGAPA---MTSRGLV-EKDFEQIGEFLSRAVTLTLDIQKTY----------------------------------------------------------------------------------------- |
8 | 5mz61 | 0.05 | 0.04 | 1.72 | 0.67 | DEthreader | | -LMFLGET--ELIEKKLKWKMD--------KSSKDMFSATEFAMNYLK------------SFSR---------------DSLVRNRIFLDGHQEDSNYYVHIGSTIWHFEMRRECALV--------------TTAQSAMNQTTNTLAYYSSI--IEEASEKNAKLMRVSCVNLLSSVNVCTIYPLHSSFAAEYMMSYAIHSDFS----WTKKLD-----------------QQRTTDM--AVLGQL----ENM-PT---WRCRLFAYVGAYAWAES-QIRNAAMADKTYSQAVELMD-KFTFLLDEVDGRMMFVDEVQKLGVAALWALILFCE-TTDEKFKS-----H------------VICPHSQWEFYPYVGRQVGVRTIYAAKCPLIVGCLWTVIMHRSKARLKYLTGAA-- |
9 | 1vt4I3 | 0.09 | 0.09 | 3.31 | 1.66 | MapAlign | | --IEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------- |
10 | 5n8oA | 0.12 | 0.12 | 4.09 | 0.52 | MUSTER | | QLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQPSLAIVSGQGGAAGQRERVAELREQGRADRRSQMNLKTPGSTVIVD-QGEKLSLKETLTLLDGAARHNVQVLITDSGQRTALMAMKDAGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESGVREQAILTQAIRSELKTQGVLGHPEVTMSPVWLDSRSRYLRDMNPETRSHDRYVIDRVTAQSHSLTAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVS--GGDRLQVASVSEDAMT------VVVPGRAEPASLPVSDSPFTALKLENGVETPGHSVATVFASVTQMAMNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGET |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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