Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCSSSSSSCSSCCHHHHHCCCHHHHHHHHHHHHHHHHCHHHSCCCCCCCCSSCSCSCCCCCCCSCCSCCCCCCCCSSCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCSCCCCCCCSCCCCCCCCCCCCSSCCCCCCSSCCCCCCCHSHCCSCCCCCCCCCCCCCSSCCCCCHHHSCCCCCCCCC MIKSQESLTLEDVAVEFTWEEWQLLGPAQKDLYRDVMLENYSNLVSVGYQASKPDALFKLEQGEPWTVENEIHSQICPEIKKVDNHLQMHSQKQRCLKRVEQCHKHNAFGNIIHQRKSDFPLRQNHDTFDLHGKILKSNLSLVNQNKRYEIKNSVGVNGDGKSFLHAKHEQFHNEMNFPEGGNSVNTNSQFIKHQRTQNIDKPHVCTECGKAFLKKSRLIYHQRVHTGEKP |
1 | 5v3jE | 0.20 | 0.19 | 5.96 | 0.79 | CEthreader | | ---------------PHKCKECGKAFHTPSQLSHHQKLHVGKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHTPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRP |
2 | 5v3jE | 0.17 | 0.14 | 4.69 | 0.68 | EigenThreader | | -PHKCKECGKAFH------------TPSQLSHHQKLHVGEK--PYKCQECGKASNAQLSLHHRVHTDEKCFECKECGK----AFMR------PSHLLRHQRIHTGEKP-----HKCKECGKAFRYDTQLSLHLLTH--------AGARRFECKDCDKVCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKP |
3 | 2rpcA | 0.20 | 0.11 | 3.47 | 1.25 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------SSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEECPREGKSFNHIRVHTGEKPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEGCDRRFANSSDRKKHMHVHTSDKS |
4 | 5v3mC | 0.21 | 0.19 | 5.89 | 1.73 | CNFpred | | -----------------------------AQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTEKPHKCKECGKAFRYDTQLSLHLLTHARRFECKDCDKVYSCASQLALHQM-SHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRLARHQRAH-PYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKP |
5 | 5v3gD | 0.23 | 0.16 | 4.89 | 2.92 | SPARKS-K | | -----------------------------------------------------------------PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKP----YVCRECGRGFRDKSHLSHQGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWLRHQRTHTGEKCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT---- |
6 | 6r9tA | 0.05 | 0.03 | 1.69 | 0.83 | DEthreader | | -----------------PAGRYDQATDTILVILAQTAATAKMVEAKG--EQQRLREAAEGL-RMATNAAQNIKKKLVQRLEHAAKQAAASATQTIAAAQHAASTPK--AS-----------K-VAEQILL---LALIAASQS---FLQ-PGGKMVAAKA----SQCAKLGQTAVQELAQAQDLTT-LN-EAAS-AAG--------KSNTSPEELGPLAAKLIEDAAVQGHA |
7 | 5v3jE | 0.17 | 0.15 | 5.00 | 1.11 | MapAlign | | --------------PHKCKECGKAFTPSQLSHHQKLHVGEKPYKCQECGKAFPLSLHHRVHTDEKC-------FECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDR- |
8 | 5v3jE | 0.22 | 0.20 | 6.29 | 1.76 | MUSTER | | QKLHVGEKPYK---KAFPS--NAQLSLHHRVH--------FE-----GKAFMRPSHLLRHQ--RIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSHQRAHSGYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKP |
9 | 5t0uA | 0.13 | 0.07 | 2.57 | 1.14 | HHsearch | | ----------------------------------------------------------------------THKCHLCGRAFRTVTLLRNH------------------------LN---THTGTRPHKCPDCDMAFVTSGELVRHRRKHTHEKPFKCSMCDYASVEVRHIRSHTPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEAK |
10 | 5v3gD | 0.19 | 0.13 | 4.33 | 0.56 | CEthreader | | ----------------------------------------------------------------PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|