Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCSSSCCCCSCCCCCHHHHCCCCCCCSSSCCCCCCCCCCCCHHHHCCCCCCCSSSCCCCCCCCCCHHHHCCCCSSSCCCCCCCCCCCHHHCCCCCCCSSSCCCCCCCCCCCCHHHHCCCCCCCSSSCCCCCCCCCCHHHCCCCCSSSCCCCSCCCCCHHHHCCCCCCCSSSCCCCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCSSSCCCCSCCCCCHHHHCCCCCCCSSSCCCCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCSSSCCCCSCCCCCHHHHCCCCCCCSSSCCCCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCCCCHCHCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAESGLAMWPSLLLLLLLPGPPPVAGLEDAAFPHLGESLQPLPRACPLRCSCPRVDTVDCDGLDLRVFPDNITRAAQHLSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSEGLPDEAFESLTQLQHLCVAHNKLSVAPQFLPRSLRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAIATLSLSNNQLSYLPPSLPPSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPAGLPRTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGNGLDRVPPALPRRLRALVLPHNHVAALGARDLVATPGLTELNLAYNRLASARVHHRAFRRLRALRSLDLAGNQLTRLPMGLPTGLRTLQLQRNQLRMLEPEPLAGLDQLRELSLAHNRLRVGDIGPGTWHELQALQVRHRLVSHTVPRAPPSPCLPCHVPNILVSW |
1 | 6gffI | 0.26 | 0.24 | 7.28 | 1.33 | DEthreader | | --------------MVDKKVSCQ------------LPPDTE-L-ILASPLGYTALRHLDLSTNEISFLQPAFLTHLEHLSLAHNRLAMATAGGLGPLPRVTSLDLSGNSLYSGLLER-LLGEAPSLHTLSLAENSLTRLTRTFMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSLTC--ISD--FS-LQQLRVLDLSCNSIEAFQTASEFQLTWLDLRENKLLHFP--DLAALPRLIYLNLSNNLIRLPI------RPLSQLLNLDLSYNEIELIPFEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLSHNALE--TLELG-ARALGSLRTLLLQGNALRDLTFANLASLQRLNLQGNRVSPCGGVAFSGITSLRSLSLVDNEIELL--RAGAFLHTP-LTELDLSSNPLEVAALGGLASLEVLALQGNGLMVLQVD-LPCFICLKRLNLAENRLSH--LPAWTQAVSLEVLDLR-NNSFSLLPAMGGLELRLYLQGNPLSN |
2 | 4kt1A | 0.24 | 0.21 | 6.62 | 2.87 | SPARKS-K | | ------------------------------------------PPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSF--IHPKALSGLKELKVLTLQNNQLKTPSEAIRSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTE--VPVHPLSNLPTLQALTLALNKISSIPDFALSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGE---FPQAIKALPSLKELGFHSNSISVIPDGAFDGLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPN---LTGTVHLESLTLTGTKISSIPNNLCQELRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQ--IKEGTFQGLISLRILDLSRNLIHEIHSRALGPITNLDVSFNELTSFPTEG---LNGLNQLKLVGNFKLKEALAAKDFVNLRSLSVPYAYQCCAFWGCIHCTPSTGHH------- |
3 | 5hyxB | 0.23 | 0.22 | 7.02 | 0.79 | MapAlign | | --EVSEIQLKEKQSSLQLTGVIPKEIGDFTELELLDLSDNSLSGDIVEIFRLKKLKTLSLNTNNLEHIPMEILSGLVELMLFDNKLSEIPR-SIGELKNLQVLRAGGNNLRG-ELPW-EIGNCENLVMLGLAETSLSGLPASILKRVQTIAIYTSLLSGPIPDEIGYCTELQNLYLYQNSISG-SIPT-TIGGLKKLQSLLLWQNNLVGIPTELCPELWLIDFSENLLTGIPR-SFGKLENLQELQLSVNQISGT-IPE-ELTNCTKLTHLEIDNNLITEIPLMSLRSLTMFFAWQNKLTNIPQ-SLSQCRELQAIDLSYNSLSG-SIPKEIFG-LRNLTKLLLLSNDLSFIPPDGCTNLYRLRLNGNRLASIPS-EIGNLKNLNFVDISENRLVGS-IPP-AISGCESLEFLDLHTNSLSSLLGTLPKSLKFIDFSDNALSTLPP-GIGLLTELTKLNLAKNRLSGEIP--REISTCRSLLLNLGENDFSGEIPDELGQIPSLAISLNL-- |
4 | 4kt1A | 0.25 | 0.21 | 6.67 | 0.34 | CEthreader | | ------------------------------------------PPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSF--IHPKALSGLKELKVLTLQNNQLKTVPSEALSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLT--EVPVHPLSNLPTLQALTLALNKISSIPDFAFSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEF---PQAIKALPSLKELGFHSNSISVIPDDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQF---PNLTGTVHLESLTLTGTKISSIPNNLQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQ--IKEGTFQGLISLRILDLSRNLIHEIHSATLGPITNLDVSFNELTSFPTE---GLNGLNQLKLVGNFKLKEALAAKDFVNLRSLSVPYAYQCCAFWGCIHCTPSTGHH------- |
5 | 5hyxB | 0.24 | 0.24 | 7.47 | 2.09 | MUSTER | | LQGSLLKSLTSLTLSSLLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEFRLKKLKTLSLNTNNLEHIPMEIGSGLVELMLFDNKLSGEIPRSIGELKNLQVLRAGGNKNLRGELP-WEIGNCENLVMLGLAETSLSGLPASIGKRVQTIAIYTSLLSGPIPDEIGYCTELQNLYLYQNSIS--GSIPTTIGGLKKLQSLLLWQNNLVGIPTELCPELWLIDFSENLLTGTIPRSFGKLENLQELQLSVNQIS--GTIPEELTNCTKLTHLEIDNNLITGIPSLMLRSLTMFFAWQNKLTGNIPQSLSQCRELQAIDLSYNSLSGS--IPKEIFGLRNLTKLLLLSNDLSGIPPDICTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIP--PAISGCESLEFLDLHTNSLSGSLLGLPKSLKFIDFSDNALSSTLPPGIGLLTELTKLNLAKNRLSEIPREISTCRSLQLLNLGENDFSGEIPDQIPSLAISLNLSCNRFVG |
6 | 4lxrA | 0.22 | 0.21 | 6.66 | 1.11 | HHsearch | | --SFGRDACSEMGLCQCAPIMVQMRRCMLPDYLGIVFESDNLGMNITRLDRLHGLKRFRFTTRRLTHIPANLLRNLSHLELRAN-IEEMPSHLFDDLENLESIEFGSNKLRQ--MPRGIFGKMPKLKQLNLWSNQLHNLTKHDATSVLGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRS--LPQGLFDHNKHLNEVRLMNNRLQSLPGDLSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNRLTH--LPDSLFAHTTNLTDLRLEDNLLTGISGDIFGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDL--QQPLPFGYMHGLLTLNLRNNSIIFVYNDWKLQLRELDLSYNNISSLGYEDLAFLSQNLHVNMTHNKIRRIAL--PEDVTYDKALVINCHSGNLTHVPRLPNMQLMELHLENNTLLRLPSANTPGYESVTSLHLAGNNLT--SIDVDQLP--TNLTHLDISWNHMLNATVLLNWRSVKLSGNPWMC |
7 | 3wpbA | 0.25 | 0.25 | 7.63 | 2.76 | FFAS-3D | | ---SAAAPRDNVTSLSLLSNDSDFAQLSNLQKLNLKWN--CPPAGLSPMLAVPTLEELNLSYNGITTVPALP-SSLVSLILSRTNILQLDPTSLTGLHALRFLYMDGNCYYKNPVAPGALLGLGNLTHLSLKYNNLTTVPRSLPPSLEYLLLSYNHIVTLAPEDLANLTALRVLDVGGNCRRCDHAHSDTFSHLSRLEGLVLKDSSLYQLNPRGLGNLTVLDLSENFLYDCKTKAFQGLAQLRRLNLSFNYHKKVSFQLGIFKDFPGLRYIDLSDNRISGAVEEDFNLSFTLDLSRNNLVTVQPEMFAQLSRLQCLRLSHNSISQAVNGS-QFVPLTSLQVLDLSHNKLHGRSFTELPRLEALDLSYNSQPFSMRGVVAQLPTLRYLSLAHNGIHSRVSQLRFFQGLRSLIRLDLSQNRLHTLLGNLPKSLQLLRLRNNYLAFFNWSSLTLLPNLETLDLAGNQLKASNGSLPSGTQLQRLDVSRNSIIFVVPGFFALRLRELNLSANALR- |
8 | 2a0zA | 0.20 | 0.18 | 5.86 | 1.00 | EigenThreader | | ------------------------------------TKCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTF--AFCTNLTELHLMSNSIQKIKNVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE--ELDIFANSSKLELSSNQIKEFSPGCFHAIGGLFLNNVQLGTEKLCLELANTSIRNLSLSNSQLSTNTTFLGLKWT--NLTMLDLSYNNLNNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFNDIPGIKSNMFTGLINLKYLSLSNSFTSLFVSLAHSPLHILNLTKNKISSDA---FSWLGHLEVLDLGLNEITGQEWRG-----LENIFEIYLSYNKYTRNSFALVPSLQRLMLRRVALVDSSPSPFQPLRNLTILDLSNNNIANINDDMLE--GLEKLEILDLQHNNLYFLKGLSHLHILNLESNGFDE |
9 | 4ufrA | 0.27 | 0.23 | 7.01 | 10.71 | CNFpred | | -------------------------------------------RGCPTHCHCEPLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLLPNPLPSLRFLEELRLAGNALT--YIPKGAFTGLYSLKVLMLQNNQLRHVPT---------------------EALQNLRSLQSLRLDANHIS--YVPPSCFSGLHSLRHLWLDDNALTEIPVQSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHS--LGKKCFDGLHSLETLDLNYNNLDEFPTAIRSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFV--GRSAFQHLPELRTLTLNGAQITEFPDLTTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDL----PSFSVCQKLQKIDLRHNEIYEIKVQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFP-----ITGLHGLTHLKLTGNHALQSLI-PELKVIEMPYAYQCC |
10 | 2a0zA | 0.17 | 0.16 | 5.31 | 1.33 | DEthreader | | ---------------VL-FAFCTNLT---------QKNLI----LSTKLGTQLENLQELLLSNNKIQALKSLDANSSLKKLELSSNQIKEFSPGCFHAGRLFGLFLNNVQLGPSLTEKLCLEANSIRNLSLSNSQLSTTSTTFLKNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI--QHLFSHSLHGLFNVRYLNLKRSFTPKIDFSFLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFSLRTLTETFVSLAHSPLHILNLTKNKISKIAFSWLGHLEVLDLGLNEIGQLTGQEWRGLENIFEIYLSYNKYL-Q-LTRNSFALVPSLQRLMLRRVALKNVPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKPIYFLKGLSHLHILNLESNGFDEIPEVFLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS--VEKKVFGPAFLELDMRFNPFDCTSIAWFNWITTILHYLCNTPY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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