Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHSSCCCCCCSSSCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPFSDLNNLPSDVVSALKNKLKKQSTATGDGVARAFLRAQAALFGSYRDALRYKPGEPITFCEESFVKHRSSVMKQFLETAINLQLFKQFIDGRLAKLNAGRGFSDVFEEEITSGGFCGGNPRSYQQWVHTVKKGGALFNTAMTKATPAVRTAYKFAKNHAKLGLKEVKSKLKHKENEEDYGTCSSSVQYTPVYKLHNEKGGNSEKRKLAQARLKRPLKSLDGALYDDEDDDDIERASKLSSEDGEEASAYLYESDDSVETRVKTPYSGEMDLLGEILDTLSTHSSDQGKLAAAKSLDFFRSMDDIDYKPTNKSNAPSENNLAFLCGGSGDQAEWNLGQDDSALHGKHLPPSPRKRVSSSGLTDSLFILKEENSNKHLGADNVSDPTSGLDFQLTSPEVSQTDKGKTEKRETLSQISDDLLIPGLGRHSSTFVPWEKEGKEAKETSEDIGLLHEVVSLCHMTSDFQQSLNISDKNTNGNQT |
1 | 6ekkA3 | 0.73 | 0.16 | 4.48 | 1.10 | FFAS-3D | | ---------PNDVISSLKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPEEPITFCEEAFVHYRSGAMRQFLQNATQLQLFKQFIDGRLDLLNSGEGFSDVFEEEIN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 4btgA | 0.11 | 0.10 | 3.68 | 1.33 | SPARKS-K | | IKADAVGKVPPT---AILEQLRTLAPSEHELFHHITTDFVCHVLSPLG--FIL-PDAAYVYRVGRTATYPNFYALVDCVRASDLTALSALISQHLANSRGNFDANAVVSSVLTILGWSPSTPKGIDQLRSNLALFIAYQDMVKQRSTIIPWEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKE----------ITAFTPVKLANNSNQRFLDVEPGDRMSATLAPIGNTFAVVKNRTAVYEAVSQRGTVNSNGAEMTLPMVAIAALRGIVDESLEARASNDLKRSHNPEVVVSEHQGVAAEQGSLYL-----------VWNVRTEYNAIEGGSIRTPEKPIQPSEVLQAKVLDLANHTTSIHIWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLGL-------GQRRERVRILKPWFVERRTSRDMQNAVTLLRKIEMIGT-TGIGASAVHLAQSRIVDQMA |
3 | 1vt4I3 | 0.08 | 0.07 | 2.89 | 1.53 | MapAlign | | ----------HRSIVDHYNIPDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFSTAWNASGSILNTLQQLKFYKPYIYERLVNAILDFLPGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 6ekkA3 | 0.74 | 0.16 | 4.54 | 4.30 | HHsearch | | ---------PNDVISSLKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPEEPITFCEEAFVSHRSGAMRQFLQNATQLQLFKQFIDGRLDLLNSGEGFSDVFEEEIN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 1vt4I3 | 0.08 | 0.08 | 3.13 | 0.79 | CEthreader | | TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
6 | 5nnpA | 0.08 | 0.07 | 2.98 | 0.87 | EigenThreader | | TREANLFRTVIRHYEDGLKAAEQILKKNPKHGDTMSMKALILNAQG------KTEEAFALAKEALTIDMKSYICWHVYGILYRTNYVQSRLNMLKARNWTALAIAYHLEGLETDCKHCLDRLAVMELRASYLSKLARKDEAAKAYRALLDRNDYYKGLISALDIEEAQKAVYDEYAAKYPRSDAAKRLPLNFLS-------------GERFRTTAKAYLTLMFDKGVPSTFANLKHLYSDSFKKETLASLAEEYLNEYVNARPSGSKGKGAALYYLAQHYNYYMSRDLTRALEYVEKAIELDPKNVDFHMTKARIFKHQGDLAKAAETMDYARSLDPKDLRNNENEKALATMGLFTRAETAGGPLADLTDMQCIWFLTEDGEAWQRRGNWQEDQFDFHSFSLRKGQIRAYVDMVRWEDRLREHPFYFRAALDAVNLYLSMYDKDPLGDAMKFLNYILQFSPKNCLKAASAIDKNHPKVLEQ |
7 | 6ekkA | 0.72 | 0.17 | 4.78 | 0.86 | FFAS-3D | | TPFDDLQSLPNDVISSLKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPEEPITFCEEAFVHYRSGAMRQFLQNATQLQLFKQFIDGRLDLLNSGEGFSDVFEEEIN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 5jcss | 0.07 | 0.06 | 2.66 | 1.21 | SPARKS-K | | ACLDHRGEAYIPELDISFSCHPNFLVFAAQNPQYQGGGRKGLPKSFVNRFSVVFIDMLTSDDLLLIAKHLYPSIPDIIAKMIKLMS-------TLEDQVCKRKFNDTLRWLKLLNQYSICED-------VDVFDFVDIIVKQRFRTISDKNKAQLLIEDCNVAVYESVLKAINNNWPLRFLASILG--PRVDVFSMNSDIDSMDI---LGGYEQVDLTRQISYITEELTNIREIISMNMKLSPNATAIMEGLNL--LKYLLNNIVTPEKFQDFRNRFNRFFSHLEGHPLLKTMSMNIEKMTEIITKEASVKLINECSQEDGQPRVLKPHPNELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFAQVHDILLLSDEEPIEESLAAVIP-ISHLGEVGKWANNV-----LNCTEYSEKKIAERL----------YVFITFLTDMGVLEKINNLYK- |
9 | 4hb2C | 0.09 | 0.03 | 1.12 | 0.71 | CNFpred | | --WNFLRTVILKLFEFMHET--------HEGVQDMACDTFIKIVQKCKYHFVIQQRESEPFIQTIIRD-QPQQVHTFYKACGIIISRNRLLSDLMQLPNMA---WDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 5cskA | 0.07 | 0.05 | 1.95 | 0.67 | DEthreader | | TVFVKSHGG-VRKWAYETFGDD--------------R-TVQ-----FVAM-NAEYI--ADQYIEVLIVDIAERADVDA-VWAGWGHASENP--------------LGDKISSTIVSADVLVSVGLVGYVAGTVEYLNQVEHTTACRIVLTTVEYIKAEKPDPLAVICGAATVAYTLF-GSK-DDFGSVEKSLVSTLENILKGYDNQVIMSLQQLEVLRNPK----SL---------LEAHEHSIFVHFLLILAILKHYQPLCLSSKVSAI-------------------------------------------------------------------------------------------PSVK-DGSYPIFTRNIHVTRGII-RT----GHIRDI-YLTSEANRLMSDILDNLEVTDTSN-----S--DLNHIFIEFGGFLERFGKRLLRLRSRYKALMG--TFKI---GMAEEIVPLT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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