Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680
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| SS Seq | CCCSSCCCCCCCCCCCCHHHSSSSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCCSSSSSCCCSSSSSSCCCCCCSSSSSSSCCCCSSSSSSCCCSSSSSSCCCCCCSSSSSSCCSSSCCCCCCCCCCCCCSSSSSSCCCCCSSSSSCCCCCSSSSSCCCCCSSCCSSSCCCCSSSSCCCCCCCCCCCCCSSSSSSCCCCCCSSSSSSCCCSSSSSSCCCCSSSSSSCCCCCSSSSSSCCCCCSSSSSCCCCSSSSSSCCCCCCCCCCCSSCCCCCCCCCCCCCSSSSSSCCCCCCSSSSSCCCCCCCCCCCCSSSSSCCCSSSSSSCCCCSSSSSSCCCCCCCCCCCCCSSSSSSSCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCHHHHSSCCCCCCCCCCCCSSSSCCCCCCCSSSCCCCCCCSSSSSSCCCCCCSCCSSSSSSSSCCCCCCCCSSSSSSSCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSSSCCCCCCSSSSSSHHHCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCC MRRFLRPGHDPVRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGQRKIEARSAEDSFTGGILVLDGHSVPLPEPLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHFGSRRAEDYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFYLISPSEFERFSLSTKWLVEPRCLVDSAETKNHRPGNGAGPKKAPSRARNSGTQSDGEEKQPGLVMERALLSDERVLKEIQSTLEGDRGSGNWRSHRAAVGCSLSNGGAE |
1 | 6n8pA | 0.97 | 0.82 | 22.86 | 2.33 | SPARKS-K | | -----------------RDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGRQVFVKCTLHTNGGTIYAFSLHSVPLPEPLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHF------GYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFYLISPSEFERFSLSTKWLVEPRCLVDS----------------------------------------------------------------------------------- |
2 | 6n8pA1 | 0.77 | 0.62 | 17.68 | 1.91 | MUSTER | | -----------------RDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTS-----------------------------------LTPAPPQRDLLLTGHEDTVRFWDA--------------SGVCLRLLYKLSTVRVFLDEWPPLRKV-------------------GSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLLELNDEAAEQAVEQVEADLLQD---QEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPA-------------------------------------- |
3 | 6n8pA | 0.80 | 0.67 | 18.98 | 0.56 | CEthreader | | -----------------RDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGDRHLLTGHEDGTVRFWDASGVCLRLLYKLSTVSDDPRLGIQKIFLCKYSGYLAVAGTAGQLELNDEAAEQAVEQVEADLLQDQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQAKEIQLMHRAPVVGILVLDGHSVPLPEPLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHFG------YGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFYLISPSEFERFSLSTKWLVEPRCLVDS----------------------------------------------------------------------------------- |
4 | 6n8pA1 | 0.78 | 0.63 | 17.92 | 2.29 | SPARKS-K | | -----------------RDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGG-----------------------------------TSLTPAPPQRDLLLTGHEDTVRFWDASGVCLRLLYKLSTVRVF-------------LDEWPPL--------------RKVGSFDPY------SDDPRLGIQKIFLCKYSGYLAVAGTAGQLVLELNDEAAEQA---VEQVEADLLQDQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPA-------------------------------------- |
5 | 6n8pA | 0.94 | 0.79 | 22.26 | 1.74 | HHsearch | | -----------------RDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGVCKIQAVAHEAVVTSGFGLFDHQRRQVFSFTGFVHGILVLGHMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHFGY------GEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFYLISPSEFERFSLSTKWLVEPRCLVDS----------------------------------------------------------------------------------- |
6 | 2oajA | 0.15 | 0.13 | 4.39 | 1.55 | HHsearch | | ----------------KNKIFSLAETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFV-KGIYLVVINAKDTVYVLSLYSQK------VLTTVF---VPG------KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDN---LQKS--SFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYEPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHRTVFETEINVPQISTNAAKISKVYWMCENPEYTSLLISHKSISRG--DNQSLTMIDGKQIFPLPTNVPIVNILPIPRQSPYAGCHNPGLILLILGNEIETMLYPS-GIFTDKFPQNLSWLRPLATTSMA-ASVPNKLWLGALSAAQ-------NKDYLLKGGTLELAVSNKGKTAGSLMLIDRRGPAIGAQSACVTCIEFGKGLCIPGIVLITGFDDIRLITLGKSKS-THKGFK---Y-PLAATGLISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHIPFPIAAKYITESSVLRNGDIAIRVSEFQASLFSTVKEQDTLAPDTLYINGIRI-PYRPQVNSLQARGTVYCTPAQLGGVNRPASKYKESIIAE-------------------------------------- |
7 | 6n8pA | 0.95 | 0.79 | 22.25 | 3.46 | FFAS-3D | | -----------------RDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTS-----LTPAPPQRDLLLTGHEDGTVRFWDASGVCSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHFGY------GEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFYLISPSEFERFSLSTKWLVEPRCLVD------------------------------------------------------------------------------------ |
8 | 2oajA | 0.15 | 0.13 | 4.48 | 1.90 | SPARKS-K | | ----------------KNKIFSLAETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGI-YLVVINAKDTVYVLSLYSQK------VLTTVFVPGK---------ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNL------QKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVT-LTYSLVENEIKQSFIYEPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMTVFETEINVPQPDYNAAKISKVYWMCENNEYTSLLISHKS--ISRGDNQSLTMIDLKQMKIFPLNVPIVNILPIPRQSPYAGCHNPGLILLILGNEIETMLYP-SGIFTDKLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQKRQKLPAEYGYDASHETLELAVSIETGDAGSLMLIDRRKSSCLATIPKMQNLSKG--LCIPGIVLITGFDDIRLITLGKSK-STHKGF----KYPLAATGLSYISTVEKNNDRLTVIITLEINGHLRVFTIPDFKEQMSEHIPFPIAAKYITESSVLRNGDIAIRVSEFQASLFSTVKEQDTLVSDTLYINGIRIPYRPQ------VNSLQWARGTVY---------------CTPAQLNELLGG---VNRPASKYKESIIAE---------- |
9 | 6n8pA | 0.87 | 0.62 | 17.46 | 8.32 | CNFpred | | -----------------RDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGRDLLLTGHE---DGTVRFWDASGV-------------------CLRLLYKLS--TVRVFL--EWPPLRKVGSF-DPRLGIQKIFLCKY---------SGYLAVAGTAGQVLVLELN--------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 2oajA | 0.14 | 0.12 | 4.16 | 2.57 | FFAS-3D | | ----------------KNKIFSLAETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKG-IYLVVINAKDTVYVLSLYSQKVLTTVF---------------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQK------SSFFPAARLSPIVSIQWNPRDIGTVLISYEYV-TLTYSLVENEIKQSFIRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTLISHKSISRGDNQSLTMIDLGYTPKIFPLPTNVPIVNILPIPRQPYFAGCHNPGLILLILGNGIETMLYPSGIFTDKASLFPQNLSWRPLATTSMAASVPNKLWLGALSAAQNKD-------YLLKGGV--RTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNGLCIPGIVLITGFDDIRLITLGKSKSTHK---GFKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHIPFPIAAKYITESSVLRNGDIAIRVSEFQASLFSTEQDTLAPVSDTLYINGIRIPYRPQVNSLQWARGTVYCTPAQLNGVNRPASKYKESIIAE-------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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