Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCSSSSSSSHHHHHHHHHHCCC MSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDDGDDFCIFSESRRPSRPSNSNISKGESRPKWKPKAKVPLQTLHMTSENQEKVKALLRDLQEQDADAGSERGLSGEEEDDEPDCCNDERYWPAGQEPSLVPDLDPLEYAGLASVEPYVPEFTVSPFAVQKLSRYGFNTERCQAVLRMCDGDVGASLEHLLTQCFSETFGERMKISEAVNQISLDECMEQRQEEAFALKSICGEKFIERIQNRVWTIGLELEYLTSRFRKSKP |
1 | 1vt4I | 0.13 | 0.13 | 4.42 | 0.70 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 5flmB1 | 0.07 | 0.07 | 2.66 | 0.63 | EigenThreader | | PYIKQEVIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGA------KPGVTKEKRIKYAKEVLQKEMLPHVGVSD----FCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNW----------GLTFASTLSHLRRLNSPGLVKNLALMVG---SQPSPILEFLEEW----------SMEKIFVNGCWVGIHKDPEQLMNTLRKLRR |
3 | 2lbcA | 0.14 | 0.05 | 1.77 | 0.60 | FFAS-3D | | -------------------------------------------------------------------------------------------------VMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASA-------------GASVFGASGLDNQPPEEIVAIITSMGFQRNQAIQALRATNNNLERALDWIF------------------------------------------------------------------------ |
4 | 2pffB | 0.17 | 0.15 | 4.90 | 0.81 | SPARKS-K | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGQGSQEQGMGMDLS------KAAQDVWNRADNHFKDTYNNPVNLTIHFGGE---KGKRIRENYSAMIFETIVDGKLKTEKIFKEEHSTSYTSATQFTQPALTLMEKAAFEDLKSKAALASLADSIESLVEVVFYRGMTMQVAVPINPGRVAASFSQEALQY------------VVERVGKRTEIVNYNVENQLRALDTVTNVLNF |
5 | 4r0zA | 0.14 | 0.06 | 2.12 | 0.50 | CNFpred | | --------------------------------------------------------------------------------------------------------ERSQTAILVAMRNLSDSA---------------------TNEENLTQ----LIIKLLEIIRVA----------NDGMTACACGTLSNLTCNNTRNKQTVCSH--GGIDALVTAIRRLP--------------------EVEEVTEPALCALRHCTAHSLAEEAQSELRF-CQAFPVILDQLETLRT |
6 | 6fb3A | 0.07 | 0.04 | 1.89 | 0.67 | DEthreader | | PAVITSIMGAEGNKLLAPVAYLAVDGSL-------T-------------AYISNRAGA-NCYSGDGYAASPGEQETLYDNGNSPFNQGRIISLLLRLNGNLRRLGDIPYKQRGSDVFELTRAY--------------YRYDGLGRRAFYALHNPTRVTHVTSESSS-----GE-EYYVASGT------------------NPDFQLVIGFHGGLYDP--LTK---------------------------DVLAGRWTSPDYMFKSNNPLSNEYFVSPPY-LTE--AG--E |
7 | 1vt4I | 0.13 | 0.13 | 4.43 | 1.11 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
8 | 2qenA | 0.14 | 0.13 | 4.48 | 0.49 | MUSTER | | MLFDLRPKTRRED---------DREEEESLENYPGIRRVGERPGILIDCRELYAERGHITREELILQSTISPFQKFQSKFKISLNLKFLTLEPRKLSL------REVFRELNDLGEELGE-EAQYLRFYGSRGGKELLAYDSLPNLKIILTGSEVGLLHDFLKITDYESPLYGRIADKDTSVEFLKRGFREVNVPENEIEEAVELLDG-IPGWLVVFGVEYLRNGDFGRLEVAKGLIMGELEELRRRSPRYVDILRAIALGYNRSLIRDYL-RLYALLENLKKMNVEEDN |
9 | 1z96A | 0.21 | 0.03 | 0.88 | 0.90 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLNSKIAQLVSMGFDPLEAAQALDAANGDLDVAASFLL------------------------------------------------------------------------ |
10 | 1vt4I3 | 0.13 | 0.13 | 4.44 | 0.67 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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